RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 SPATA2Q9UM82 520 aa2.54□□□□□ -2
SMC6-208ENST00000481708 NDRG2Q9UN36 371 aaKnown RBP2.54□□□□□ -2
SMC6-208ENST00000481708 TP53TG1Q9Y2A0 90 aa2.54□□□□□ -2
SMC6-208ENST00000481708 PRG3Q9Y2Y8 225 aaPredicted RBP2.54□□□□□ -2
SMC6-208ENST00000481708 ZNF337Q9Y3M9 751 aa2.54□□□□□ -2
SMC6-208ENST00000481708 ITPR3Q14573 2671 aa2.54□□□□□ -2
SMC6-208ENST00000481708 SRP72O76094 671 aaKnown RBP2.54□□□□□ -2
SMC6-208ENST00000481708 HLA-AP01891 365 aaKnown RBP2.54□□□□□ -2
SMC6-208ENST00000481708 GNAO1P09471 354 aa2.54□□□□□ -2
SMC6-208ENST00000481708 CT45A10P0DMU9 189 aa2.54□□□□□ -2
SMC6-208ENST00000481708 DTYMKP23919 212 aa2.54□□□□□ -2
SMC6-208ENST00000481708 PSMA1P25786 263 aaKnown RBP2.54□□□□□ -2
SMC6-208ENST00000481708 TSFMP43897 325 aaKnown RBP2.54□□□□□ -2
SMC6-208ENST00000481708 GPR6P46095 362 aaPredicted RBP2.54□□□□□ -2
SMC6-208ENST00000481708 HOXA1P49639 335 aaPredicted RBP2.54□□□□□ -2
SMC6-208ENST00000481708 TAF6P49848 677 aa2.54□□□□□ -2
SMC6-208ENST00000481708 OR2T5Q6IEZ7 315 aa2.54□□□□□ -2
SMC6-208ENST00000481708 TBC1D19Q8N5T2 526 aa2.54□□□□□ -2
SMC6-208ENST00000481708 ST6GALNAC3Q8NDV1 305 aa2.54□□□□□ -2
SMC6-208ENST00000481708 OR2T29Q8NH02 315 aa2.54□□□□□ -2
SMC6-208ENST00000481708 NEK7Q8TDX7 302 aa2.54□□□□□ -2
SMC6-208ENST00000481708 SRSF12Q8WXF0 261 aaKnown RBP2.54□□□□□ -2
SMC6-208ENST00000481708 RAB8BQ92930 207 aa2.54□□□□□ -2
SMC6-208ENST00000481708 ING2Q9H160 280 aa2.54□□□□□ -2
SMC6-208ENST00000481708 MS4A6AQ9H2W1 248 aa2.54□□□□□ -2
SMC6-208ENST00000481708 VAPAQ9P0L0 249 aa2.54□□□□□ -2
SMC6-208ENST00000481708 CES1P1Q9UKY3 287 aa2.54□□□□□ -2
SMC6-208ENST00000481708 FAM220BPB1ANY3 271 aa2.53□□□□□ -2
SMC6-208ENST00000481708 M0R1B8 84 aa2.53□□□□□ -2
SMC6-208ENST00000481708 GCM2O75603 506 aaPredicted RBP2.53□□□□□ -2
SMC6-208ENST00000481708 MELTFP08582 738 aa2.53□□□□□ -2
SMC6-208ENST00000481708 SLC2A1P11166 492 aa2.53□□□□□ -2
SMC6-208ENST00000481708 LAMP1P11279 417 aa2.53□□□□□ -2
SMC6-208ENST00000481708 CTRLP40313 264 aa2.53□□□□□ -2
SMC6-208ENST00000481708 GPM6AP51674 278 aa2.53□□□□□ -2
SMC6-208ENST00000481708 MAGOHP61326 146 aaKnown RBP2.53□□□□□ -2
SMC6-208ENST00000481708 ARF6P62330 175 aa2.53□□□□□ -2
SMC6-208ENST00000481708 SRSF4Q08170 494 aaKnown RBP2.53□□□□□ -2
SMC6-208ENST00000481708 CD200R1LQ6Q8B3 271 aa2.53□□□□□ -2
SMC6-208ENST00000481708 LINC00173Q6ZV60 143 aa2.53□□□□□ -2
SMC6-208ENST00000481708 DEFB124Q8NES8 71 aa2.53□□□□□ -2
SMC6-208ENST00000481708 PRSS3P2Q8NHM4 247 aa2.53□□□□□ -2
SMC6-208ENST00000481708 RPUSD4Q96CM3 377 aaKnown RBP2.53□□□□□ -2
SMC6-208ENST00000481708 OR52B2Q96RD2 323 aa2.53□□□□□ -2
SMC6-208ENST00000481708 HBEGFQ99075 208 aa2.53□□□□□ -2
SMC6-208ENST00000481708 SDHCQ99643 169 aaPredicted RBP2.53□□□□□ -2
SMC6-208ENST00000481708 PDCD1LG2Q9BQ51 273 aa2.53□□□□□ -2
SMC6-208ENST00000481708 TMEM208Q9BTX3 173 aa2.53□□□□□ -2
SMC6-208ENST00000481708 RSPO3Q9BXY4 272 aaPredicted RBP2.53□□□□□ -2
SMC6-208ENST00000481708 FBXL15Q9H469 300 aa2.53□□□□□ -2
SMC6-208ENST00000481708 MYOZ1Q9NP98 299 aaPredicted RBP2.53□□□□□ -2
SMC6-208ENST00000481708 RBFOX1Q9NWB1 397 aaKnown RBP2.53□□□□□ -2
SMC6-208ENST00000481708 CLCF1Q9UBD9 225 aa2.53□□□□□ -2
SMC6-208ENST00000481708 VPREB3Q9UKI3 123 aa2.53□□□□□ -2
SMC6-208ENST00000481708 COPS3Q9UNS2 423 aa2.53□□□□□ -2
SMC6-208ENST00000481708 ARGFXA6NJG6 315 aa2.53□□□□□ -2
SMC6-208ENST00000481708 DHRS7CA6NNS2 312 aa2.53□□□□□ -2
SMC6-208ENST00000481708 CDC40O60508 579 aaKnown RBP eCLIP2.53□□□□□ -2
SMC6-208ENST00000481708 IGLL1P15814 213 aa2.53□□□□□ -2
SMC6-208ENST00000481708 MYCNOSP40205 109 aa2.53□□□□□ -2
SMC6-208ENST00000481708 NDUFA8P51970 172 aa2.53□□□□□ -2
SMC6-208ENST00000481708 PSME3P61289 254 aa2.53□□□□□ -2
SMC6-208ENST00000481708 NUTF2P61970 127 aaKnown RBP2.53□□□□□ -2
SMC6-208ENST00000481708 ARL6IP1Q15041 203 aa2.53□□□□□ -2
SMC6-208ENST00000481708 ZNF146Q15072 292 aa2.53□□□□□ -2
SMC6-208ENST00000481708 OR1Q1Q15612 314 aa2.53□□□□□ -2
SMC6-208ENST00000481708 PARP15Q460N3 678 aa2.53□□□□□ -2
SMC6-208ENST00000481708 MORN5Q5VZ52 161 aa2.53□□□□□ -2
SMC6-208ENST00000481708 DNAJC24Q6P3W2 148 aa2.53□□□□□ -2
SMC6-208ENST00000481708 CNIH2Q6PI25 160 aa2.53□□□□□ -2
SMC6-208ENST00000481708 SSX7Q7RTT5 188 aa2.53□□□□□ -2
SMC6-208ENST00000481708 GPR32P1Q8NGA4 272 aa2.53□□□□□ -2
SMC6-208ENST00000481708 OR4D10Q8NGI6 311 aa2.53□□□□□ -2
SMC6-208ENST00000481708 OR52E2Q8NGJ4 325 aa2.53□□□□□ -2
SMC6-208ENST00000481708 APH1BQ8WW43 257 aa2.53□□□□□ -2
SMC6-208ENST00000481708 NMUR2Q9GZQ4 415 aa2.53□□□□□ -2
SMC6-208ENST00000481708 CD274Q9NZQ7 290 aa2.53□□□□□ -2
SMC6-208ENST00000481708 SMPXQ9UHP9 88 aa2.53□□□□□ -2
SMC6-208ENST00000481708 USH1CQ9Y6N9 552 aa2.53□□□□□ -2
SMC6-208ENST00000481708 DYSFO75923 2080 aa2.53□□□□□ -2
SMC6-208ENST00000481708 C2CD3Q4AC94 2353 aa2.53□□□□□ -2
SMC6-208ENST00000481708 A0A087WWV3 80 aa2.53□□□□□ -2
SMC6-208ENST00000481708 FAM240AA0A1B0GVK7 77 aa2.53□□□□□ -2
SMC6-208ENST00000481708 A8MX80 341 aa2.53□□□□□ -2
SMC6-208ENST00000481708 H7C417 338 aa2.53□□□□□ -2
SMC6-208ENST00000481708 PAX6P26367 422 aa2.53□□□□□ -2
SMC6-208ENST00000481708 IL5RAQ01344 420 aa2.53□□□□□ -2
SMC6-208ENST00000481708 ZNF266Q14584 549 aa2.53□□□□□ -2
SMC6-208ENST00000481708 MUC21Q5SSG8 566 aa2.53□□□□□ -2
SMC6-208ENST00000481708 RAB43Q86YS6 212 aa2.53□□□□□ -2
SMC6-208ENST00000481708 RIMKLAQ8IXN7 391 aa2.53□□□□□ -2
SMC6-208ENST00000481708 C10orf67Q8IYJ2 551 aa2.53□□□□□ -2
SMC6-208ENST00000481708 ZCCHC24Q8N2G6 241 aaKnown RBP2.53□□□□□ -2
SMC6-208ENST00000481708 ZADH2Q8N4Q0 377 aa2.53□□□□□ -2
SMC6-208ENST00000481708 NPWQ8N729 165 aa2.53□□□□□ -2
SMC6-208ENST00000481708 ARMCX1Q9P291 453 aa2.53□□□□□ -2
SMC6-208ENST00000481708 MTFP1Q9UDX5 166 aa2.53□□□□□ -2
SMC6-208ENST00000481708 TMCO1Q9UM00 188 aa2.53□□□□□ -2
SMC6-208ENST00000481708 HES2Q9Y543 173 aa2.53□□□□□ -2
SMC6-208ENST00000481708 HECTD1Q9ULT8 2610 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms