RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 SCOCQ9UIL1 159 aa12.51□□□□□ -0.41
ITGB1-211ENST00000475184 OR52A1Q9UKL2 312 aa12.51□□□□□ -0.41
ITGB1-211ENST00000475184 ZNF256Q9Y2P7 627 aaPredicted RBP12.51□□□□□ -0.41
ITGB1-211ENST00000475184 R4GMQ9 66 aa12.51□□□□□ -0.41
ITGB1-211ENST00000475184 STARD9Q9P2P6 4700 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 FAM90A18PA6NE21 464 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 FAM90A16PA6NEW6 464 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 FAM90A20PA6NIJ5 464 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 FAM90A9PA6NNJ1 464 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 FAM90A12PA8MX19 464 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 FAM90A5PA8MXJ8 464 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 FAM90A15PP0C7V4 464 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 FAM90A13PP0C7W8 464 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 FAM90A14PP0C7W9 464 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 FAM90A24PP0C7X0 464 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 PRRX1P54821 245 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 KPNB1Q14974 876 aaKnown RBP12.5□□□□□ -0.41
ITGB1-211ENST00000475184 ZNF146Q15072 292 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 UBE2V2Q15819 145 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 SPATS1Q496A3 300 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 SLC35E3Q7Z769 313 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 FOXRED2Q8IWF2 684 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 STPG2Q8N412 459 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 CORO2AQ92828 525 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 RPEQ96AT9 228 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 DCLRE1BQ9H816 532 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 PCDHB16Q9NRJ7 776 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 TAS2R3Q9NYW6 316 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 SMAD5-AS1Q9Y6J3 95 aa12.5□□□□□ -0.41
ITGB1-211ENST00000475184 A0A087X0M5 115 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 TRBV2A0A0J9YWF9 115 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 A0A1B0GX30 115 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 TCRBV5S2A0A599 114 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 CCDC182A6NF36 153 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 SIRPB1O00241 398 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 FGF16O43320 207 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 ENTPD6O75354 484 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 IGHG2P01859 326 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 RPLP1P05386 114 aaKnown RBP12.49□□□□□ -0.41
ITGB1-211ENST00000475184 TMEM11P17152 192 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 CCL1P22362 96 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 PTGFRP43088 359 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 NPBWR2P48146 333 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 FUT6P51993 359 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 SNU13P55769 128 aaKnown RBP12.49□□□□□ -0.41
ITGB1-211ENST00000475184 CDC42P60953 191 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 CDK5Q00535 292 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 GK3PQ14409 553 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 HES1Q14469 280 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 TEX38Q6PEX7 206 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 ZNF322Q6U7Q0 402 aaPredicted RBP12.49□□□□□ -0.41
ITGB1-211ENST00000475184 PLEKHG7Q6ZR37 379 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 SBSPONQ8IVN8 264 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 FAM58AQ8N1B3 248 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 OR4D6Q8NGJ1 314 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 TOMM40LQ969M1 308 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 APOL4Q9BPW4 351 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 SNX5Q9Y5X3 404 aa12.49□□□□□ -0.41
ITGB1-211ENST00000475184 FUOMA2VDF0 154 aa12.48□□□□□ -0.41
ITGB1-211ENST00000475184 MAGEB4O15481 346 aaPredicted RBP12.48□□□□□ -0.41
ITGB1-211ENST00000475184 GATBO75879 557 aaKnown RBP12.48□□□□□ -0.41
ITGB1-211ENST00000475184 PRKACAP17612 351 aa12.48□□□□□ -0.41
ITGB1-211ENST00000475184 BCL3P20749 454 aa12.48□□□□□ -0.41
ITGB1-211ENST00000475184 GLIPR1P48060 266 aa12.48□□□□□ -0.41
ITGB1-211ENST00000475184 CXCR4P61073 352 aa12.48□□□□□ -0.41
ITGB1-211ENST00000475184 KIR2DS1Q14954 304 aa12.48□□□□□ -0.41
ITGB1-211ENST00000475184 SPIN3Q5JUX0 258 aa12.48□□□□□ -0.41
ITGB1-211ENST00000475184 UTF1Q5T230 341 aa12.48□□□□□ -0.41
ITGB1-211ENST00000475184 LCNL1Q6ZST4 164 aa12.48□□□□□ -0.41
ITGB1-211ENST00000475184 DEFB107AQ8IZN7 70 aa12.48□□□□□ -0.41
ITGB1-211ENST00000475184 DRAM1Q8N682 238 aa12.48□□□□□ -0.41
ITGB1-211ENST00000475184 BORCS8Q96FH0 119 aa12.48□□□□□ -0.41
ITGB1-211ENST00000475184 CNN2Q99439 309 aaKnown RBP12.48□□□□□ -0.41
ITGB1-211ENST00000475184 CHST5Q9GZS9 411 aa12.48□□□□□ -0.41
ITGB1-211ENST00000475184 ARGLU1Q9NWB6 273 aaPredicted RBP12.48□□□□□ -0.41
ITGB1-211ENST00000475184 A0A1W2PPI3 338 aa12.47□□□□□ -0.41
ITGB1-211ENST00000475184 ODAMA1E959 279 aa12.47□□□□□ -0.41
ITGB1-211ENST00000475184 H3BSH0 61 aa12.47□□□□□ -0.41
ITGB1-211ENST00000475184 LY86O95711 162 aa12.47□□□□□ -0.41
ITGB1-211ENST00000475184 CALCBP10092 127 aa12.47□□□□□ -0.41
ITGB1-211ENST00000475184 OSMP13725 252 aa12.47□□□□□ -0.41
ITGB1-211ENST00000475184 ACTR3P61158 418 aa12.47□□□□□ -0.41
ITGB1-211ENST00000475184 AESQ08117 197 aa12.47□□□□□ -0.41
ITGB1-211ENST00000475184 HNF4GQ14541 408 aa12.47□□□□□ -0.41
ITGB1-211ENST00000475184 ODF4Q2M2E3 257 aa12.47□□□□□ -0.41
ITGB1-211ENST00000475184 ZNF260Q3ZCT1 412 aa12.47□□□□□ -0.41
ITGB1-211ENST00000475184 FAM98BQ52LJ0 330 aaKnown RBP12.47□□□□□ -0.41
ITGB1-211ENST00000475184 CXorf66Q5JRM2 361 aaPredicted RBP12.47□□□□□ -0.41
ITGB1-211ENST00000475184 C16orf89Q6UX73 402 aa12.47□□□□□ -0.41
ITGB1-211ENST00000475184 TEX12Q9BXU0 123 aa12.47□□□□□ -0.41
ITGB1-211ENST00000475184 AMMECR1Q9Y4X0 333 aaPredicted RBP12.47□□□□□ -0.41
ITGB1-211ENST00000475184 AP4M1O00189 453 aa12.46□□□□□ -0.41
ITGB1-211ENST00000475184 OR2H2O95918 312 aa12.46□□□□□ -0.41
ITGB1-211ENST00000475184 CYB5AP00167 134 aa12.46□□□□□ -0.41
ITGB1-211ENST00000475184 NFYBP25208 207 aa12.46□□□□□ -0.41
ITGB1-211ENST00000475184 CDX1P47902 265 aaPredicted RBP12.46□□□□□ -0.41
ITGB1-211ENST00000475184 POU3F4P49335 361 aa12.46□□□□□ -0.41
ITGB1-211ENST00000475184 PNLIPRP3Q17RR3 467 aa12.46□□□□□ -0.41
ITGB1-211ENST00000475184 TMEM236Q5W0B7 351 aa12.46□□□□□ -0.41
ITGB1-211ENST00000475184 OR9G1Q8NH87 305 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms