RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 DCSTAMPQ9H295 470 aa8.59□□□□□ -1.03
CASC3-204ENST00000474190 LIN7BQ9HAP6 207 aa8.59□□□□□ -1.03
CASC3-204ENST00000474190 NEK6Q9HC98 313 aa8.59□□□□□ -1.03
CASC3-204ENST00000474190 GHRLQ9UBU3 117 aa8.59□□□□□ -1.03
CASC3-204ENST00000474190 KCNK7Q9Y2U2 307 aa8.59□□□□□ -1.03
CASC3-204ENST00000474190 ABCA1O95477 2261 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 ISPDA4D126 451 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 K7N7A8 449 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 RAB27BO00194 218 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 DVL1O14640 695 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 PHF1O43189 567 aaPredicted RBP8.58□□□□□ -1.04
CASC3-204ENST00000474190 ADAM20O43506 726 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 HTR3BO95264 441 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 OCMP0CE72 109 aaPredicted RBP8.58□□□□□ -1.04
CASC3-204ENST00000474190 UBBP0CG47 229 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 ARSBP15848 533 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 SERPINA2P20848 420 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 PSMD7P51665 324 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 SNU13P55769 128 aaKnown RBP8.58□□□□□ -1.04
CASC3-204ENST00000474190 IL13RA2Q14627 380 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 RSU1Q15404 277 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 TAF9Q16594 264 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 MOGAT2Q3SYC2 334 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 SPIN3Q5JUX0 258 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 OR2W3Q7Z3T1 314 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 MUC20Q8N307 709 aaPredicted RBP8.58□□□□□ -1.04
CASC3-204ENST00000474190 OR4S1Q8NGB4 309 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 FAM46BQ96A09 425 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 MSI2Q96DH6 328 aaKnown RBP8.58□□□□□ -1.04
CASC3-204ENST00000474190 CPNE2Q96FN4 548 aaPredicted RBP8.58□□□□□ -1.04
CASC3-204ENST00000474190 TIMD4Q96H15 378 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 COQ2Q96H96 371 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 SMR3AQ99954 134 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 GAL3ST1Q99999 423 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 MRI1Q9BV20 369 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 SLIRPQ9GZT3 109 aaKnown RBP8.58□□□□□ -1.04
CASC3-204ENST00000474190 ELL3Q9HB65 397 aaPredicted RBP8.58□□□□□ -1.04
CASC3-204ENST00000474190 MMP26Q9NRE1 261 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 DNAJB11Q9UBS4 358 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 DAPK2Q9UIK4 370 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 ST3GAL6Q9Y274 331 aa8.58□□□□□ -1.04
CASC3-204ENST00000474190 SONP18583 2426 aaKnown RBP8.58□□□□□ -1.04
CASC3-204ENST00000474190 ZNF701M0R085 212 aaPredicted RBP8.57□□□□□ -1.04
CASC3-204ENST00000474190 TMPRSS2O15393 492 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 SOCS1O15524 211 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 NDUFA2O43678 99 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 ZNF780AO75290 641 aaPredicted RBP8.57□□□□□ -1.04
CASC3-204ENST00000474190 MPIG6BO95866 241 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 TK1P04183 234 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 GTF2F2P13984 249 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 PAX5Q02548 391 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 PLAC9Q5JTB6 97 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 BRICD5Q6PL45 260 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 USP43Q70EL4 1123 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 GAPTQ8N292 157 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 SPICQ8N5J4 248 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 C11orf42Q8N5U0 333 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 PNLDC1Q8NA58 520 aaKnown RBP8.57□□□□□ -1.04
CASC3-204ENST00000474190 LY6G5BQ8NDX9 201 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 PLPPR1Q8TBJ4 325 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 LGALS14Q8TCE9 139 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 MRPS24Q96EL2 167 aaKnown RBP8.57□□□□□ -1.04
CASC3-204ENST00000474190 NEIL1Q96FI4 390 aaPredicted RBP8.57□□□□□ -1.04
CASC3-204ENST00000474190 NXF2Q9GZY0 626 aaKnown RBP8.57□□□□□ -1.04
CASC3-204ENST00000474190 PLGRKTQ9HBL7 147 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 MIOXQ9UGB7 285 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 OR14J1Q9UGF5 321 aa8.57□□□□□ -1.04
CASC3-204ENST00000474190 NSD1Q96L73 2696 aaPredicted RBP8.57□□□□□ -1.04
CASC3-204ENST00000474190 MXRA5Q9NR99 2828 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 SMIM31A0A1B0GVY4 71 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 SIRPB1O00241 398 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 CRTAPO75718 401 aaPredicted RBP8.56□□□□□ -1.04
CASC3-204ENST00000474190 CHRM2P08172 466 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 CD99P14209 185 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 RPS2P15880 293 aaKnown RBP8.56□□□□□ -1.04
CASC3-204ENST00000474190 RAB6AP20340 208 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 CPT2P23786 658 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 CHATP28329 748 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 GABRA2P47869 451 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 PITPNBP48739 271 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 BMXP51813 675 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 DLX6P56179 175 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 IL13RA1P78552 427 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 IKZF1Q13422 519 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 C1orf229Q6ZS94 237 aaPredicted RBP8.56□□□□□ -1.04
CASC3-204ENST00000474190 PEG10Q86TG7 708 aaKnown RBP8.56□□□□□ -1.04
CASC3-204ENST00000474190 ZNF561Q8N587 486 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 KCNG3Q8TAE7 436 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 C8orf46Q8TAG6 207 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 DYRK2Q92630 601 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 PTX4Q96A99 478 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 SELENOIQ9C0D9 397 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 MIXL1Q9H2W2 232 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 RSL24D1Q9UHA3 163 aaKnown RBP8.56□□□□□ -1.04
CASC3-204ENST00000474190 ELF5Q9UKW6 265 aaPredicted RBP8.56□□□□□ -1.04
CASC3-204ENST00000474190 CR1P17927 2039 aa8.56□□□□□ -1.04
CASC3-204ENST00000474190 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.55□□□□□ -1.04
CASC3-204ENST00000474190 FN1P02751 2386 aaKnown RBP8.55□□□□□ -1.04
CASC3-204ENST00000474190 FAM90A10PA6NDY2 464 aa8.55□□□□□ -1.04
CASC3-204ENST00000474190 FAM90A18PA6NE21 464 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms