RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 ADAT3Q96EY9 351 aaPredicted RBP16.53■□□□□ 0.24
APP-215ENST00000474136 CPNE2Q96FN4 548 aaPredicted RBP16.53■□□□□ 0.24
APP-215ENST00000474136 CHST5Q9GZS9 411 aa16.53■□□□□ 0.24
APP-215ENST00000474136 PPA2Q9H2U2 334 aa16.53■□□□□ 0.24
APP-215ENST00000474136 CNTD2Q9H8S5 307 aa16.53■□□□□ 0.24
APP-215ENST00000474136 FN3KRPQ9HA64 309 aa16.53■□□□□ 0.24
APP-215ENST00000474136 AURKAIP1Q9NWT8 199 aaPredicted RBP16.53■□□□□ 0.24
APP-215ENST00000474136 MRPL15Q9P015 296 aaKnown RBP16.53■□□□□ 0.24
APP-215ENST00000474136 DNAJB11Q9UBS4 358 aa16.53■□□□□ 0.24
APP-215ENST00000474136 FBLN5Q9UBX5 448 aa16.53■□□□□ 0.24
APP-215ENST00000474136 MPC1Q9Y5U8 109 aa16.53■□□□□ 0.24
APP-215ENST00000474136 A0A1W2PPK0 400 aa16.52■□□□□ 0.24
APP-215ENST00000474136 ANKRD61A6NGH8 418 aa16.52■□□□□ 0.24
APP-215ENST00000474136 OOEPA6NGQ2 149 aa16.52■□□□□ 0.24
APP-215ENST00000474136 MAGEB3O15480 346 aa16.52■□□□□ 0.24
APP-215ENST00000474136 OCMP0CE72 109 aaPredicted RBP16.52■□□□□ 0.24
APP-215ENST00000474136 FAHP16930 419 aa16.52■□□□□ 0.24
APP-215ENST00000474136 IGFBP3P17936 291 aaPredicted RBP16.52■□□□□ 0.24
APP-215ENST00000474136 CA6P23280 308 aa16.52■□□□□ 0.24
APP-215ENST00000474136 ANOS1P23352 680 aa16.52■□□□□ 0.24
APP-215ENST00000474136 OR8G1Q15617 311 aa16.52■□□□□ 0.24
APP-215ENST00000474136 C1orf122Q6ZSJ8 110 aa16.52■□□□□ 0.24
APP-215ENST00000474136 CDH26Q8IXH8 852 aa16.52■□□□□ 0.24
APP-215ENST00000474136 NKAIN3Q8N8D7 197 aa16.52■□□□□ 0.24
APP-215ENST00000474136 OR56B2PQ8NGI1 322 aa16.52■□□□□ 0.24
APP-215ENST00000474136 ST8SIA4Q92187 359 aa16.52■□□□□ 0.24
APP-215ENST00000474136 DCSTAMPQ9H295 470 aa16.52■□□□□ 0.24
APP-215ENST00000474136 TMEM138Q9NPI0 162 aa16.52■□□□□ 0.24
APP-215ENST00000474136 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.52■□□□□ 0.24
APP-215ENST00000474136 SIRT7Q9NRC8 400 aa16.52■□□□□ 0.24
APP-215ENST00000474136 RPUSD1Q9UJJ7 312 aaKnown RBP16.52■□□□□ 0.24
APP-215ENST00000474136 TRAV38-1A0A0B4J264 116 aa16.51■□□□□ 0.23
APP-215ENST00000474136 A0A1B0GW55 424 aa16.51■□□□□ 0.23
APP-215ENST00000474136 SULT1B1O43704 296 aa16.51■□□□□ 0.23
APP-215ENST00000474136 NRASP01111 189 aa16.51■□□□□ 0.23
APP-215ENST00000474136 ALDOBP05062 364 aa16.51■□□□□ 0.23
APP-215ENST00000474136 DUX4L2P0CJ85 424 aa16.51■□□□□ 0.23
APP-215ENST00000474136 DUX4L3P0CJ86 424 aa16.51■□□□□ 0.23
APP-215ENST00000474136 DUX4L4P0CJ87 422 aa16.51■□□□□ 0.23
APP-215ENST00000474136 DUX4L5P0CJ88 424 aa16.51■□□□□ 0.23
APP-215ENST00000474136 DUX4L6P0CJ89 424 aa16.51■□□□□ 0.23
APP-215ENST00000474136 DUX4L7P0CJ90 424 aa16.51■□□□□ 0.23
APP-215ENST00000474136 VSIG8P0DPA2 414 aa16.51■□□□□ 0.23
APP-215ENST00000474136 PRKACBP22694 351 aa16.51■□□□□ 0.23
APP-215ENST00000474136 ACKR3P25106 362 aa16.51■□□□□ 0.23
APP-215ENST00000474136 SDC2P34741 201 aa16.51■□□□□ 0.23
APP-215ENST00000474136 SOX6P35712 828 aa16.51■□□□□ 0.23
APP-215ENST00000474136 SERPINB10P48595 397 aa16.51■□□□□ 0.23
APP-215ENST00000474136 CNN3Q15417 329 aaKnown RBP16.51■□□□□ 0.23
APP-215ENST00000474136 VAX1Q5SQQ9 334 aa16.51■□□□□ 0.23
APP-215ENST00000474136 FAM27D1Q5T7N8 215 aa16.51■□□□□ 0.23
APP-215ENST00000474136 FOXB2Q5VYV0 432 aa16.51■□□□□ 0.23
APP-215ENST00000474136 TMEM42Q69YG0 159 aa16.51■□□□□ 0.23
APP-215ENST00000474136 DUX4L9Q6RFH8 374 aaPredicted RBP16.51■□□□□ 0.23
APP-215ENST00000474136 ZNF826PQ6ZT77 177 aa16.51■□□□□ 0.23
APP-215ENST00000474136 FAM90A1Q86YD7 464 aa16.51■□□□□ 0.23
APP-215ENST00000474136 LYG1Q8N1E2 194 aa16.51■□□□□ 0.23
APP-215ENST00000474136 OR1M1Q8NGA1 313 aa16.51■□□□□ 0.23
APP-215ENST00000474136 PPP1R35Q8TAP8 253 aa16.51■□□□□ 0.23
APP-215ENST00000474136 FOXRED1Q96CU9 486 aaPredicted RBP16.51■□□□□ 0.23
APP-215ENST00000474136 HIST1H2AAQ96QV6 131 aa16.51■□□□□ 0.23
APP-215ENST00000474136 PPIL3Q9H2H8 161 aaKnown RBP16.51■□□□□ 0.23
APP-215ENST00000474136 ONECUT1Q9UBC0 465 aa16.51■□□□□ 0.23
APP-215ENST00000474136 DUX4Q9UBX2 424 aa16.51■□□□□ 0.23
APP-215ENST00000474136 KPTNQ9Y664 436 aa16.51■□□□□ 0.23
APP-215ENST00000474136 IGHV3OR15-7A0A075B7D8 119 aa16.5■□□□□ 0.23
APP-215ENST00000474136 NDUFA2O43678 99 aa16.5■□□□□ 0.23
APP-215ENST00000474136 GMDSO60547 372 aa16.5■□□□□ 0.23
APP-215ENST00000474136 CDRT1O95170 752 aa16.5■□□□□ 0.23
APP-215ENST00000474136 RAB3BP20337 219 aa16.5■□□□□ 0.23
APP-215ENST00000474136 BDKRB2P30411 391 aa16.5■□□□□ 0.23
APP-215ENST00000474136 EFNB2P52799 333 aa16.5■□□□□ 0.23
APP-215ENST00000474136 KLRD1Q13241 179 aa16.5■□□□□ 0.23
APP-215ENST00000474136 ZNF529Q6P280 563 aa16.5■□□□□ 0.23
APP-215ENST00000474136 PNKDQ8N490 385 aa16.5■□□□□ 0.23
APP-215ENST00000474136 SPSB1Q96BD6 273 aa16.5■□□□□ 0.23
APP-215ENST00000474136 NECAP2Q9NVZ3 263 aa16.5■□□□□ 0.23
APP-215ENST00000474136 C1orf123Q9NWV4 160 aa16.5■□□□□ 0.23
APP-215ENST00000474136 TAS2R4Q9NYW5 299 aa16.5■□□□□ 0.23
APP-215ENST00000474136 SLC7A11Q9UPY5 501 aa16.5■□□□□ 0.23
APP-215ENST00000474136 ANXA2P2A6NMY6 339 aa16.49■□□□□ 0.23
APP-215ENST00000474136 RNASEK-C17orf49H0YIS7 233 aa16.49■□□□□ 0.23
APP-215ENST00000474136 PTBP3O95758 552 aaKnown RBP16.49■□□□□ 0.23
APP-215ENST00000474136 ECDO95905 644 aaPredicted RBP16.49■□□□□ 0.23
APP-215ENST00000474136 RORCP51449 518 aa16.49■□□□□ 0.23
APP-215ENST00000474136 MZT1Q08AG7 82 aa16.49■□□□□ 0.23
APP-215ENST00000474136 SPCS2Q15005 226 aa16.49■□□□□ 0.23
APP-215ENST00000474136 GLT8D1Q68CQ7 371 aa16.49■□□□□ 0.23
APP-215ENST00000474136 GCSAMQ8N6F7 178 aa16.49■□□□□ 0.23
APP-215ENST00000474136 SPERTQ8NA61 448 aa16.49■□□□□ 0.23
APP-215ENST00000474136 DNAAF1Q8NEP3 725 aa16.49■□□□□ 0.23
APP-215ENST00000474136 CFHR4Q92496 578 aa16.49■□□□□ 0.23
APP-215ENST00000474136 PIGCQ92535 297 aa16.49■□□□□ 0.23
APP-215ENST00000474136 ADAT1Q9BUB4 502 aaKnown RBP16.49■□□□□ 0.23
APP-215ENST00000474136 PAPOLGQ9BWT3 736 aaKnown RBP16.49■□□□□ 0.23
APP-215ENST00000474136 RNF167Q9H6Y7 350 aa16.49■□□□□ 0.23
APP-215ENST00000474136 TRAV8-7A0A075B6U6 113 aa16.48■□□□□ 0.23
APP-215ENST00000474136 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.48■□□□□ 0.23
APP-215ENST00000474136 NPFFO15130 113 aa16.48■□□□□ 0.23
APP-215ENST00000474136 ATF1P18846 271 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms