RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 MRASO14807 208 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 MYL12BO14950 172 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 RDH16O75452 317 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 CA11O75493 328 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 BANF1O75531 89 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 SLC25A14O95258 325 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-212ENST00000473961 DHFRP00374 187 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 C1QAP02745 245 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 HLA-DPB1P04440 258 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 HTR1AP08908 422 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 ERGP11308 486 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 CD36P16671 472 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 MYL12AP19105 171 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 MAGP20916 626 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 MAGEA6P43360 314 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 P2RX1P51575 399 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 CLDN6P56747 220 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF121P58317 390 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-212ENST00000473961 UBE2MP61081 183 aaKnown RBP2.93□□□□□ -1.94
BRCA1-212ENST00000473961 UBE2NP61088 152 aaKnown RBP2.93□□□□□ -1.94
BRCA1-212ENST00000473961 TSPAN5P62079 268 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 NCS1P62166 190 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 SNRPFP62306 86 aaKnown RBP2.93□□□□□ -1.94
BRCA1-212ENST00000473961 LSM3P62310 102 aaKnown RBP2.93□□□□□ -1.94
BRCA1-212ENST00000473961 LCN2P80188 198 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 GTF2BQ00403 316 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 REG3AQ06141 175 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 STX4Q12846 297 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 SLAMF1Q13291 335 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 UNC119Q13432 240 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 GGTLC2Q14390 218 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 RPEL1Q2QD12 228 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 RNF212Q495C1 297 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 C3orf33Q6P1S2 294 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 PLET1Q6UQ28 207 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 WDR82Q6UXN9 313 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 SLC35D2Q76EJ3 337 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 C9orf62Q8N4C0 152 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 TRAM1L1Q8N609 369 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 DNAAF3Q8N9W5 541 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 GATSQ8NAP1 163 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 OR1M1Q8NGA1 313 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 POP5Q969H6 163 aaKnown RBP2.93□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF285Q96NJ3 590 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 TAAR1Q96RJ0 339 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 SDHCQ99643 169 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-212ENST00000473961 FOXC2Q99958 501 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 TCEAL7Q9BRU2 100 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 TMEM175Q9BSA9 504 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 HDHD3Q9BSH5 251 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-212ENST00000473961 MED18Q9BUE0 208 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 PDCD10Q9BUL8 212 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 CCDC90BQ9GZT6 254 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 FBXO44Q9H4M3 255 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 DUSP21Q9H596 190 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 PATZ1Q9HBE1 687 aaKnown RBP2.93□□□□□ -1.94
BRCA1-212ENST00000473961 COPZ2Q9P299 210 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 RPS6KB2Q9UBS0 482 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 SCML1Q9UN30 329 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 DOCK2Q92608 1830 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 UBR1Q8IWV7 1749 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 CICQ96RK0 1608 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-212ENST00000473961 TECPR2O15040 1411 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 NAV1Q8NEY1 1877 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 C5P01031 1676 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 PXDNQ92626 1479 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 IGHV3-74A0A0B4J1X5 117 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 LOC100130705A0A1B0GUX0 176 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF729A6NN14 1252 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 H0Y9J4 135 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 DNASE2O00115 360 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 KCNK1O00180 336 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 UBDO15205 165 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 SIVA1O15304 175 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 SGCEO43556 437 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 CST8O60676 142 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 MPDU1O75352 247 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 NDUFS6O75380 124 aaKnown RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 CRTAPO75718 401 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 PIAS1O75925 651 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 SCELO95171 688 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ETHE1O95571 254 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 TNNC2P02585 160 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF17P17021 662 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 RCC1P18754 421 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ELK1P19419 428 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 TUBG1P23258 451 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 RPS3P23396 243 aaKnown RBP eCLIP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 PSMB9P28065 219 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 TGFBR2P37173 567 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 CDKN2BP42772 138 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 CXCL5P42830 114 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 SPCS3P61009 180 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 RRAS2P62070 204 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 PPP1CBP62140 327 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 RPS15AP62244 130 aaKnown RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 SNRPD2P62316 118 aaKnown RBP2.92□□□□□ -1.94
BRCA1-212ENST00000473961 SLC35A2P78381 396 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 SEMG2Q02383 582 aa2.92□□□□□ -1.94
BRCA1-212ENST00000473961 ERCC8Q13216 396 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms