RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 MRPS14O60783 128 aaKnown RBP14.85□□□□□ -0.03
SNX4-204ENST00000473417 CPEP16870 476 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 OR3A4PP47883 348 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 CAV3P56539 151 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 ARF6P62330 175 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 RPS25P62851 125 aaKnown RBP14.85□□□□□ -0.03
SNX4-204ENST00000473417 DEFB112Q30KQ8 113 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 C11orf91Q3C1V1 193 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 FAM27D1Q5T7N8 215 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 FIP1L1Q6UN15 594 aaKnown RBP14.85□□□□□ -0.03
SNX4-204ENST00000473417 ZNF367Q7RTV3 350 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 CEACAM19Q7Z692 300 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 SVOPQ8N4V2 548 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 ASCC1Q8N9N2 400 aaKnown RBP14.85□□□□□ -0.03
SNX4-204ENST00000473417 THRSPQ92748 146 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 WDFY2Q96P53 400 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 SIRPDQ9H106 197 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 CNTD2Q9H8S5 307 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 ING4Q9UNL4 249 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 GSTK1Q9Y2Q3 226 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 LRRC42Q9Y546 428 aa14.85□□□□□ -0.03
SNX4-204ENST00000473417 TOX4O94842 621 aa14.84□□□□□ -0.03
SNX4-204ENST00000473417 CDRT1O95170 752 aa14.84□□□□□ -0.03
SNX4-204ENST00000473417 HAND1O96004 215 aa14.84□□□□□ -0.03
SNX4-204ENST00000473417 CHRM2P08172 466 aa14.84□□□□□ -0.03
SNX4-204ENST00000473417 RUSC1-AS1Q66K80 236 aa14.84□□□□□ -0.03
SNX4-204ENST00000473417 SPARTQ8N0X7 666 aa14.84□□□□□ -0.03
SNX4-204ENST00000473417 LY6G5BQ8NDX9 201 aa14.84□□□□□ -0.03
SNX4-204ENST00000473417 PXT1Q8NFP0 134 aa14.84□□□□□ -0.03
SNX4-204ENST00000473417 OR10K1Q8NGX5 313 aa14.84□□□□□ -0.03
SNX4-204ENST00000473417 CENPVL3A0A0U1RRI6 287 aa14.83□□□□□ -0.04
SNX4-204ENST00000473417 HOXA3O43365 443 aaPredicted RBP14.83□□□□□ -0.04
SNX4-204ENST00000473417 TK1P04183 234 aa14.83□□□□□ -0.04
SNX4-204ENST00000473417 PTGFRP43088 359 aa14.83□□□□□ -0.04
SNX4-204ENST00000473417 GP2P55259 537 aaKnown RBP14.83□□□□□ -0.04
SNX4-204ENST00000473417 ZNF146Q15072 292 aa14.83□□□□□ -0.04
SNX4-204ENST00000473417 RSU1Q15404 277 aa14.83□□□□□ -0.04
SNX4-204ENST00000473417 SPIN3Q5JUX0 258 aa14.83□□□□□ -0.04
SNX4-204ENST00000473417 METTL11BQ5VVY1 283 aa14.83□□□□□ -0.04
SNX4-204ENST00000473417 SHISA2Q6UWI4 295 aa14.83□□□□□ -0.04
SNX4-204ENST00000473417 JAGN1Q8N5M9 183 aa14.83□□□□□ -0.04
SNX4-204ENST00000473417 ONECUT1Q9UBC0 465 aa14.83□□□□□ -0.04
SNX4-204ENST00000473417 GLS2Q9UI32 602 aa14.83□□□□□ -0.04
SNX4-204ENST00000473417 TRRAPQ9Y4A5 3859 aa14.83□□□□□ -0.04
SNX4-204ENST00000473417 A0A1W2PQ09 198 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 TMEM82A0PJX8 343 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 K7N7A8 449 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 ZNF737O75373 536 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 SC5DO75845 299 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 HTR3BO95264 441 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 SCN1BQ07699 218 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 PDCD1Q15116 288 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 C16orf87Q6PH81 154 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 FAM185AQ8N0U4 392 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 OR4M1Q8NGD0 313 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 C8orf46Q8TAG6 207 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 ZDHHC16Q969W1 377 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 NR1H4Q96RI1 486 aaPredicted RBP14.82□□□□□ -0.04
SNX4-204ENST00000473417 FAM234AQ9H0X4 552 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 PPIL3Q9H2H8 161 aaKnown RBP14.82□□□□□ -0.04
SNX4-204ENST00000473417 RHOFQ9HBH0 211 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 TCF7L1Q9HCS4 588 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 EXOSC4Q9NPD3 245 aaKnown RBP14.82□□□□□ -0.04
SNX4-204ENST00000473417 C19orf12Q9NSK7 152 aa14.82□□□□□ -0.04
SNX4-204ENST00000473417 SF3B6Q9Y3B4 125 aaKnown RBP14.82□□□□□ -0.04
SNX4-204ENST00000473417 SIRPB1O00241 398 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 SH2D1BO14796 132 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 GABRR1P24046 479 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 MTNR1BP49286 362 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 TRAM1Q15629 374 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 SSX1Q16384 188 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 HSD17B12Q53GQ0 312 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 ZNF773Q6PK81 442 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 ASCL4Q6XD76 172 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 Q6YL49 198 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 TMEM91Q6ZNR0 172 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 TAF15Q92804 592 aaKnown RBP eCLIP14.81□□□□□ -0.04
SNX4-204ENST00000473417 MUL1Q969V5 352 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 SNX22Q96L94 193 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 S100A13Q99584 98 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 CHST6Q9GZX3 395 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 METTL9Q9H1A3 318 aa14.81□□□□□ -0.04
SNX4-204ENST00000473417 UNKLQ9H9P5 680 aaKnown RBP14.81□□□□□ -0.04
SNX4-204ENST00000473417 SEBOXQ9HB31 216 aaPredicted RBP14.81□□□□□ -0.04
SNX4-204ENST00000473417 TRBV23-1A0A0A0MS06 115 aa14.8□□□□□ -0.04
SNX4-204ENST00000473417 IGHV1-69DA0A0B4J2H0 117 aa14.8□□□□□ -0.04
SNX4-204ENST00000473417 PSPNO60542 156 aa14.8□□□□□ -0.04
SNX4-204ENST00000473417 OR2H2O95918 312 aa14.8□□□□□ -0.04
SNX4-204ENST00000473417 IGHV1-69P01742 117 aa14.8□□□□□ -0.04
SNX4-204ENST00000473417 MELTFP08582 738 aa14.8□□□□□ -0.04
SNX4-204ENST00000473417 UCHL1P09936 223 aa14.8□□□□□ -0.04
SNX4-204ENST00000473417 ZNF44P15621 663 aa14.8□□□□□ -0.04
SNX4-204ENST00000473417 PSMA1P25786 263 aaKnown RBP14.8□□□□□ -0.04
SNX4-204ENST00000473417 PSMB9P28065 219 aa14.8□□□□□ -0.04
SNX4-204ENST00000473417 BMXP51813 675 aa14.8□□□□□ -0.04
SNX4-204ENST00000473417 RPL31P62899 125 aaKnown RBP14.8□□□□□ -0.04
SNX4-204ENST00000473417 FABP5Q01469 135 aa14.8□□□□□ -0.04
SNX4-204ENST00000473417 KCTD21Q4G0X4 260 aa14.8□□□□□ -0.04
SNX4-204ENST00000473417 UBE2UQ5VVX9 321 aa14.8□□□□□ -0.04
SNX4-204ENST00000473417 ELP2Q6IA86 826 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms