RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 IGHV1-8P0DP01 117 aa11.42□□□□□ -0.58
COMMD3-208ENST00000470045 LMO1P25800 156 aa11.42□□□□□ -0.58
COMMD3-208ENST00000470045 EDDM3AQ14507 147 aa11.42□□□□□ -0.58
COMMD3-208ENST00000470045 KISS1Q15726 138 aa11.42□□□□□ -0.58
COMMD3-208ENST00000470045 GRK1Q15835 563 aa11.42□□□□□ -0.58
COMMD3-208ENST00000470045 ZNF626Q68DY1 528 aa11.42□□□□□ -0.58
COMMD3-208ENST00000470045 TMPRSS11AQ6ZMR5 421 aa11.42□□□□□ -0.58
COMMD3-208ENST00000470045 ZNF782Q6ZMW2 699 aaPredicted RBP11.42□□□□□ -0.58
COMMD3-208ENST00000470045 Q6ZSV7 163 aa11.42□□□□□ -0.58
COMMD3-208ENST00000470045 ZNF485Q8NCK3 441 aa11.42□□□□□ -0.58
COMMD3-208ENST00000470045 OR11H6Q8NGC7 330 aa11.42□□□□□ -0.58
COMMD3-208ENST00000470045 GPR148Q8TDV2 347 aa11.42□□□□□ -0.58
COMMD3-208ENST00000470045 TSEN15Q8WW01 171 aaKnown RBP11.42□□□□□ -0.58
COMMD3-208ENST00000470045 ZNF714Q96N38 554 aa11.42□□□□□ -0.58
COMMD3-208ENST00000470045 CHST6Q9GZX3 395 aa11.42□□□□□ -0.58
COMMD3-208ENST00000470045 C16orf95Q9H693 158 aa11.42□□□□□ -0.58
COMMD3-208ENST00000470045 EXOSC4Q9NPD3 245 aaKnown RBP11.42□□□□□ -0.58
COMMD3-208ENST00000470045 hADV38S2A0JD32 116 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 H3BUX3 64 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 OGG1O15527 345 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 TSPAN9O75954 239 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 CLPXO76031 633 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 OR2H2O95918 312 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 LALBAP00709 142 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 CSN2P05814 226 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 HCKP08631 526 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 CALCBP10092 127 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 GABRR1P24046 479 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 COX7A1P24310 79 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 TGFBR2P37173 567 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 SNU13P55769 128 aaKnown RBP11.41□□□□□ -0.58
COMMD3-208ENST00000470045 P2RX3P56373 397 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 PROK1P58294 105 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 LRRC75BQ2VPJ9 315 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 DHRS7BQ6IAN0 325 aaPredicted RBP11.41□□□□□ -0.58
COMMD3-208ENST00000470045 LAIR2Q6ISS4 152 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 TPRX1Q8N7U7 411 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 PXT1Q8NFP0 134 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 OR51A2Q8NGJ7 313 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 OR52N1Q8NH53 320 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 PPP1R35Q8TAP8 253 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 FBLIM1Q8WUP2 373 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 SMIM19Q96E16 107 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 SSX3Q99909 188 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 CITED1Q99966 193 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 GLS2Q9UI32 602 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 GSTK1Q9Y2Q3 226 aa11.41□□□□□ -0.58
COMMD3-208ENST00000470045 TBL2Q9Y4P3 447 aaKnown RBP11.41□□□□□ -0.58
COMMD3-208ENST00000470045 SIRT4Q9Y6E7 314 aaPredicted RBP11.41□□□□□ -0.58
COMMD3-208ENST00000470045 MEX3AA1L020 520 aaKnown RBP11.4□□□□□ -0.58
COMMD3-208ENST00000470045 VGLL3A8MV65 326 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 SIRPB1O00241 398 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 GABRPO00591 440 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 SH2D1BO14796 132 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 CD2P06729 351 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 GNAO1P09471 354 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 MYL12AP19105 171 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 RAB3AP20336 220 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 CAPGP40121 348 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 LDLRAD2Q5SZI1 272 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 DMKNQ6E0U4 476 aaPredicted RBP11.4□□□□□ -0.58
COMMD3-208ENST00000470045 ELP2Q6IA86 826 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 Q6P435 159 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 TREML4Q6UXN2 200 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 LHFPL4Q7Z7J7 247 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 CHST4Q8NCG5 386 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 Q8NFD4 153 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 OR13D1Q8NGV5 346 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 PIFOQ8TCI5 191 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 CPNE2Q96FN4 548 aaPredicted RBP11.4□□□□□ -0.58
COMMD3-208ENST00000470045 TMEM80Q96HE8 168 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 BABAM2Q9NXR7 383 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 CLEC2DQ9UHP7 191 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 RNF114Q9Y508 228 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 PCDHGB5Q9Y5G0 923 aa11.4□□□□□ -0.58
COMMD3-208ENST00000470045 TRBV5-5A0A0J9YX44 114 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 MEGF11A6BM72 1044 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 TMEM225BP0DP42 221 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 PAX6P26367 422 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 SOX2P48431 317 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 MTNR1BP49286 362 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 LGALS4P56470 323 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 KRTAP10-3P60369 221 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 SRSF4Q08170 494 aaKnown RBP11.39□□□□□ -0.59
COMMD3-208ENST00000470045 ASCL4Q6XD76 172 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 C8orf59Q8N0T1 100 aaPredicted RBP11.39□□□□□ -0.59
COMMD3-208ENST00000470045 DYNAPQ8N1N2 210 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 GGHQ92820 318 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 CORO2AQ92828 525 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 TMEM106AQ96A25 262 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 FOXRED1Q96CU9 486 aaPredicted RBP11.39□□□□□ -0.59
COMMD3-208ENST00000470045 PLCXD1Q9NUJ7 323 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 TAS2R4Q9NYW5 299 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 CNOT2Q9NZN8 540 aaKnown RBP11.39□□□□□ -0.59
COMMD3-208ENST00000470045 ZNF281Q9Y2X9 895 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 UBE2J1Q9Y385 318 aaPredicted RBP11.39□□□□□ -0.59
COMMD3-208ENST00000470045 SESN1Q9Y6P5 492 aa11.39□□□□□ -0.59
COMMD3-208ENST00000470045 KIAA2026Q5HYC2 2103 aa11.38□□□□□ -0.59
COMMD3-208ENST00000470045 A0A0G2JK05 382 aa11.38□□□□□ -0.59
COMMD3-208ENST00000470045 EFCAB10A6NFE3 127 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms