RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 CTSZQ9UBR2 303 aa10.49□□□□□ -0.73
SPTLC1-204ENST00000469778 OR14J1Q9UGF5 321 aa10.49□□□□□ -0.73
SPTLC1-204ENST00000469778 STEAP1Q9UHE8 339 aa10.49□□□□□ -0.73
SPTLC1-204ENST00000469778 KCNS2Q9ULS6 477 aa10.49□□□□□ -0.73
SPTLC1-204ENST00000469778 ACANP16112 2415 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 ABCA1O95477 2261 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 A0A0G2JK05 382 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 KIAA1324LA8MWY0 1029 aaPredicted RBP10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 CA11O75493 328 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 IL1AP01583 271 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 MGMTP16455 207 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 SERPINA2P20848 420 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 ZFP36P26651 326 aaKnown RBP10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 ERP29P30040 261 aaKnown RBP10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 TMBIM6P55061 237 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 RBM11P57052 281 aaKnown RBP10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 LCN2P80188 198 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 COL10A1Q03692 680 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 MEF2CQ06413 473 aaPredicted RBP10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 IKZF1Q13422 519 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 RBM39Q14498 530 aaKnown RBP10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 DCAF12L2Q5VW00 463 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 GDPD3Q7L5L3 318 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM216BQ8N7L0 139 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 ZNRF1Q8ND25 227 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 LY6G5BQ8NDX9 201 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM3DQ96BQ1 224 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 CENPOQ9BU64 300 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 RPUSD1Q9UJJ7 312 aaKnown RBP10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 CELSR1Q9NYQ6 3014 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 MALRD1Q5VYJ5 2156 aa10.48□□□□□ -0.73
SPTLC1-204ENST00000469778 F8P00451 2351 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 IGHV2-70DA0A0C4DH43 119 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 hCG_1809904A0A1W2PP81 198 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 A0A1W2PPE2 198 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 A0A1W2PR64 198 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 A0A1W2PRV1 198 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 TMEM14DPA8MWL7 114 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 PHF1O43189 567 aaPredicted RBP10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 CRTAPO75718 401 aaPredicted RBP10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 OR2H2O95918 312 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 ZNF44P15621 663 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 NDUFB7P17568 137 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 SDC2P34741 201 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 RBMXP38159 391 aaKnown RBP10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 QRFPP83859 136 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 HOXA4Q00056 320 aaPredicted RBP10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 PAX2Q02962 417 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 KRTAP1-1Q07627 177 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 HNRNPA0Q13151 305 aaKnown RBP10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 Q6P435 159 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 BTN2A1Q7KYR7 527 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 CMTM4Q8IZR5 234 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 KIR3DL3Q8N743 410 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 ASCC1Q8N9N2 400 aaKnown RBP10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 TMEM185AQ8NFB2 350 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 RAB2BQ8WUD1 216 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 ST8SIA4Q92187 359 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 DACT3Q96B18 629 aaPredicted RBP10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 GFI1Q99684 422 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 DCTN5Q9BTE1 182 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 TM2D1Q9BX74 207 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 BARHL1Q9BZE3 327 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 YAE1D1Q9NRH1 226 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 RAB22AQ9UL26 194 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 INSIG2Q9Y5U4 225 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 MED13LQ71F56 2210 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 CSPG4Q6UVK1 2322 aa10.47□□□□□ -0.73
SPTLC1-204ENST00000469778 YLPM1P49750 1951 aaKnown RBP10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 CR1P17927 2039 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.46□□□□□ -0.739e-8■■■■■ 29.1
SPTLC1-204ENST00000469778 SHISA3A0PJX4 238 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 METTL21EPA6NDL7 271 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 POM121CA8CG34 1229 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 OR7C1O76099 320 aaPredicted RBP10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 GABARAPO95166 117 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 VSIG8P0DPA2 414 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 CALCBP10092 127 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 RAB6AP20340 208 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 HNF1AP20823 631 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 FUT3P21217 361 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 GABRR1P24046 479 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 DUSP1P28562 367 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 SEC61A1P61619 476 aaKnown RBP10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 RPL31P62899 125 aaKnown RBP10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 RPS27AP62979 156 aaKnown RBP10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 PAX8Q06710 450 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 SCN1BQ07699 218 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 SCGB2A2Q13296 93 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 DYNC1I2Q13409 638 aaKnown RBP10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 BLMHQ13867 455 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 ARL6IP1Q15041 203 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 GRK1Q15835 563 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 C2orf76Q3KRA6 126 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 C17orf107Q6ZR85 190 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 FAM89BQ8N5H3 189 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 OR10K1Q8NGX5 313 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 KCTD12Q96CX2 325 aaKnown RBP10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 Q96M66 194 aa10.46□□□□□ -0.73
SPTLC1-204ENST00000469778 NUDT16L1Q9BRJ7 211 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms