RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 SPSB1Q96BD6 273 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 SMIM19Q96E16 107 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 BORCS8Q96FH0 119 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 AJUBAQ96IF1 538 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 CEP19Q96LK0 163 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 OPALINQ96PE5 141 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 MYCBPQ99417 103 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 VCXQ9H320 206 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 ZCCHC4Q9H5U6 513 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 CNTD2Q9H8S5 307 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 RBFOX1Q9NWB1 397 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 SLC25A10Q9UBX3 287 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 TRBV5-5A0A0J9YX44 114 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 A0A1W2PRD5 423 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 A0A1W2PRF3 423 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 A0A1W2PRM7 423 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 SULT1B1O43704 296 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 ZNF737O75373 536 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 ALX3O95076 343 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 SERPINA3P01011 423 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 OPN1MWP04001 364 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 OPN1MW2P0DN77 364 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 OPN1MW3P0DN78 364 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 MYL12AP19105 171 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 PRKACBP22694 351 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 MYF6P23409 242 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 PRDX2P32119 198 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 SAA4P35542 130 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 TGFBR2P37173 567 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 POU3F4P49335 361 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 EFNB2P52799 333 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 ATP1B3P54709 279 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 PDZK1IP1Q13113 114 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 C6orf141Q5SZD1 244 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 SLC35E4Q6ICL7 350 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 HCP5Q6MZN7 132 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 TMPRSS11AQ6ZMR5 421 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 TCF23Q7RTU1 214 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 TMEM185AQ8NFB2 350 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 TSEN15Q8WW01 171 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 CFHR4Q92496 578 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 MED30Q96HR3 178 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 DMRTB1Q96MA1 342 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 NKX3-1Q99801 234 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 ANKRD60Q9BZ19 345 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 COMMD4Q9H0A8 199 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 C19orf12Q9NSK7 152 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 PGPEP1Q9NXJ5 209 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 BABAM2Q9NXR7 383 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 TAS2R4Q9NYW5 299 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 FBLN5Q9UBX5 448 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 OR14J1Q9UGF5 321 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 FOXJ3Q9UPW0 622 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 DHDHQ9UQ10 334 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 LSM2Q9Y333 95 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 SIGLEC9Q9Y336 463 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 FAM96BQ9Y3D0 163 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 PCDHGB5Q9Y5G0 923 aa6.44□□□□□ -1.38
CDC42BPA-210ENST00000462553 STAB2Q8WWQ8 2551 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 TRBV5-7A0A0A0MS05 114 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 TMEM82A0PJX8 343 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 MAGEA13PA6NCF6 341 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 H3BUX3 64 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 ANGPTL7O43827 346 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 KDM4BO94953 1096 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 INMTO95050 263 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 ATP6V1G2O95670 118 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 CDK1P06493 297 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 CALCBP10092 127 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 NDUFB7P17568 137 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 IGFBP3P17936 291 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 SOX2P48431 317 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 MTCP1P56278 107 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 WNT4P56705 351 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 SLC35A2P78381 396 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 COL10A1Q03692 680 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 RIPK1Q13546 671 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 IRF3Q14653 427 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 HERPUD1Q15011 391 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 ZNF146Q15072 292 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 RNLSQ5VYX0 342 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 IZUMO2Q6UXV1 221 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 ZNF561Q8N587 486 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 NANOGP1Q8N7R0 232 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 OR5D18Q8NGL1 313 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 OR5R1Q8NH85 324 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 GPR148Q8TDV2 347 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 H1FXQ92522 213 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 EMG1Q92979 244 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 ORAI1Q96D31 301 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 PPA2Q9H2U2 334 aa6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 SEBOXQ9HB31 216 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-210ENST00000462553 TRBV23-1A0A0A0MS06 115 aa6.42□□□□□ -1.38
CDC42BPA-210ENST00000462553 PNMA8CA0A1B0GUJ8 204 aa6.42□□□□□ -1.38
CDC42BPA-210ENST00000462553 MEIOCA2RUB1 952 aa6.42□□□□□ -1.38
CDC42BPA-210ENST00000462553 BTBD17A6NE02 478 aa6.42□□□□□ -1.38
CDC42BPA-210ENST00000462553 K7N7A8 449 aa6.42□□□□□ -1.38
CDC42BPA-210ENST00000462553 M0R1W7 72 aa6.42□□□□□ -1.38
CDC42BPA-210ENST00000462553 GABRPO00591 440 aa6.42□□□□□ -1.38
CDC42BPA-210ENST00000462553 PIN1P1O15428 100 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms