RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 IGKV1D-12P01611 117 aa16.92■□□□□ 0.3
SRM-202ENST00000459997 MT-ND2P03891 347 aa16.92■□□□□ 0.3
SRM-202ENST00000459997 CAPGP40121 348 aa16.92■□□□□ 0.3
SRM-202ENST00000459997 SLC34A1Q06495 639 aa16.92■□□□□ 0.3
SRM-202ENST00000459997 DYNC1I2Q13409 638 aaKnown RBP16.92■□□□□ 0.3
SRM-202ENST00000459997 ZNF626Q68DY1 528 aa16.92■□□□□ 0.3
SRM-202ENST00000459997 CRIP3Q6Q6R5 217 aa16.92■□□□□ 0.3
SRM-202ENST00000459997 RNF144BQ7Z419 303 aa16.92■□□□□ 0.3
SRM-202ENST00000459997 DYNAPQ8N1N2 210 aa16.92■□□□□ 0.3
SRM-202ENST00000459997 OR4S1Q8NGB4 309 aa16.92■□□□□ 0.3
SRM-202ENST00000459997 OR11H6Q8NGC7 330 aa16.92■□□□□ 0.3
SRM-202ENST00000459997 PIFOQ8TCI5 191 aa16.92■□□□□ 0.3
SRM-202ENST00000459997 FOXRED1Q96CU9 486 aaPredicted RBP16.92■□□□□ 0.3
SRM-202ENST00000459997 ZCCHC4Q9H5U6 513 aa16.92■□□□□ 0.3
SRM-202ENST00000459997 GSTK1Q9Y2Q3 226 aa16.92■□□□□ 0.3
SRM-202ENST00000459997 SIGLEC9Q9Y336 463 aa16.92■□□□□ 0.3
SRM-202ENST00000459997 TBL2Q9Y4P3 447 aaKnown RBP16.92■□□□□ 0.3
SRM-202ENST00000459997 TMEM212A6NML5 194 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 E9PI62 339 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 SH2D1BO14796 132 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 MGST3O14880 152 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 CHST1O43916 411 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 KDM4BO94953 1096 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 ZFPL1O95159 310 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 LIMS3P0CW19 117 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 LIMS4P0CW20 117 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 OR3A1P47881 315 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 KLHL22Q53GT1 634 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 TRAPPC6BQ86SZ2 158 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 SETD9Q8NE22 299 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 OR5AK2Q8NH90 309 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 COMMD4Q9H0A8 199 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 MMP27Q9H306 513 aa16.91■□□□□ 0.3
SRM-202ENST00000459997 FGF20Q9NP95 211 aaPredicted RBP16.91■□□□□ 0.3
SRM-202ENST00000459997 EXOSC4Q9NPD3 245 aaKnown RBP16.91■□□□□ 0.3
SRM-202ENST00000459997 VGLL3A8MV65 326 aa16.9■□□□□ 0.3
SRM-202ENST00000459997 OR2H2O95918 312 aa16.9■□□□□ 0.3
SRM-202ENST00000459997 HCKP08631 526 aa16.9■□□□□ 0.3
SRM-202ENST00000459997 RPSAP08865 295 aaKnown RBP16.9■□□□□ 0.3
SRM-202ENST00000459997 P2RX3P56373 397 aa16.9■□□□□ 0.3
SRM-202ENST00000459997 MRPL28Q13084 256 aaKnown RBP16.9■□□□□ 0.3
SRM-202ENST00000459997 FAM189A2Q15884 450 aa16.9■□□□□ 0.3
SRM-202ENST00000459997 SSX2Q16385 188 aa16.9■□□□□ 0.3
SRM-202ENST00000459997 LAIR2Q6ISS4 152 aa16.9■□□□□ 0.3
SRM-202ENST00000459997 LIAT1Q6ZQX7 453 aa16.9■□□□□ 0.3
SRM-202ENST00000459997 MALSU1Q96EH3 234 aa16.9■□□□□ 0.3
SRM-202ENST00000459997 PDCD1LG2Q9BQ51 273 aa16.9■□□□□ 0.3
SRM-202ENST00000459997 RANBP3Q9H6Z4 567 aaPredicted RBP16.9■□□□□ 0.3
SRM-202ENST00000459997 PCDHGB5Q9Y5G0 923 aa16.9■□□□□ 0.3
SRM-202ENST00000459997 SESN1Q9Y6P5 492 aa16.9■□□□□ 0.3
SRM-202ENST00000459997 CCDC159P0C7I6 412 aa16.89■□□□□ 0.29
SRM-202ENST00000459997 ERP29P30040 261 aaKnown RBP16.89■□□□□ 0.29
SRM-202ENST00000459997 KIR2DS4P43632 304 aa16.89■□□□□ 0.29
SRM-202ENST00000459997 ETV1P50549 477 aa16.89■□□□□ 0.29
SRM-202ENST00000459997 RAB13P51153 203 aa16.89■□□□□ 0.29
SRM-202ENST00000459997 GBX2P52951 348 aaPredicted RBP16.89■□□□□ 0.29
SRM-202ENST00000459997 IL18R1Q13478 541 aa16.89■□□□□ 0.29
SRM-202ENST00000459997 LDLRAD2Q5SZI1 272 aa16.89■□□□□ 0.29
SRM-202ENST00000459997 SERPINA12Q8IW75 414 aa16.89■□□□□ 0.29
SRM-202ENST00000459997 SAXO1Q8IYX7 474 aa16.89■□□□□ 0.29
SRM-202ENST00000459997 OR5D14Q8NGL3 314 aa16.89■□□□□ 0.29
SRM-202ENST00000459997 OR2T6Q8NHC8 308 aa16.89■□□□□ 0.29
SRM-202ENST00000459997 TSEN15Q8WW01 171 aaKnown RBP16.89■□□□□ 0.29
SRM-202ENST00000459997 NPFFR1Q9GZQ6 430 aa16.89■□□□□ 0.29
SRM-202ENST00000459997 ABCB10Q9NRK6 738 aa16.89■□□□□ 0.29
SRM-202ENST00000459997 DHDHQ9UQ10 334 aa16.89■□□□□ 0.29
SRM-202ENST00000459997 IGHV2-26A0A0B4J1V2 119 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 SULT1B1O43704 296 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 TSPAN15O95858 294 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 TMEM225BP0DP42 221 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 EFNB2P52799 333 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 DEFA6Q01524 100 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 SCN1BQ07699 218 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 KISS1Q15726 138 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 C8orf59Q8N0T1 100 aaPredicted RBP16.88■□□□□ 0.29
SRM-202ENST00000459997 PARP16Q8N5Y8 322 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 RPS4Y2Q8TD47 263 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 NKX3-1Q99801 234 aaPredicted RBP16.88■□□□□ 0.29
SRM-202ENST00000459997 JAM3Q9BX67 310 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 TMEM133Q9H2Q1 129 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 VCXQ9H320 206 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 RHOFQ9HBH0 211 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 TCF19Q9Y242 345 aa16.88■□□□□ 0.29
SRM-202ENST00000459997 UBE2J1Q9Y385 318 aaPredicted RBP16.88■□□□□ 0.29
SRM-202ENST00000459997 ZNF44P15621 663 aa16.87■□□□□ 0.29
SRM-202ENST00000459997 AQP4P55087 323 aa16.87■□□□□ 0.29
SRM-202ENST00000459997 C2orf68Q2NKX9 166 aa16.87■□□□□ 0.29
SRM-202ENST00000459997 C11orf88Q6PI97 169 aa16.87■□□□□ 0.29
SRM-202ENST00000459997 HAVCR2Q8TDQ0 301 aa16.87■□□□□ 0.29
SRM-202ENST00000459997 TFAP2CQ92754 450 aa16.87■□□□□ 0.29
SRM-202ENST00000459997 GGHQ92820 318 aa16.87■□□□□ 0.29
SRM-202ENST00000459997 CLEC7AQ9BXN2 247 aa16.87■□□□□ 0.29
SRM-202ENST00000459997 HILPDAQ9Y5L2 63 aa16.87■□□□□ 0.29
SRM-202ENST00000459997 HSPE1-MOB4S4R3N1 261 aa16.87■□□□□ 0.29
SRM-202ENST00000459997 TRGV10A0A0A0MS01 117 aa16.86■□□□□ 0.29
SRM-202ENST00000459997 FUOMA2VDF0 154 aa16.86■□□□□ 0.29
SRM-202ENST00000459997 MEGF11A6BM72 1044 aa16.86■□□□□ 0.29
SRM-202ENST00000459997 XPNPEP2O43895 674 aa16.86■□□□□ 0.29
SRM-202ENST00000459997 MMP23AO75900 390 aa16.86■□□□□ 0.29
SRM-202ENST00000459997 ALX3O95076 343 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms