RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 KISS1Q15726 138 aa17.24■□□□□ 0.35
HMGB3-205ENST00000455596 AANATQ16613 207 aa17.24■□□□□ 0.35
HMGB3-205ENST00000455596 RPL22L1Q6P5R6 122 aaKnown RBP17.24■□□□□ 0.35
HMGB3-205ENST00000455596 BRICD5Q6PL45 260 aa17.24■□□□□ 0.35
HMGB3-205ENST00000455596 CRIP3Q6Q6R5 217 aa17.24■□□□□ 0.35
HMGB3-205ENST00000455596 TPRX1Q8N7U7 411 aa17.24■□□□□ 0.35
HMGB3-205ENST00000455596 PPA2Q9H2U2 334 aa17.24■□□□□ 0.35
HMGB3-205ENST00000455596 C16orf95Q9H693 158 aa17.24■□□□□ 0.35
HMGB3-205ENST00000455596 KIAA2026Q5HYC2 2103 aa17.23■□□□□ 0.35
HMGB3-205ENST00000455596 MAGEB3O15480 346 aa17.23■□□□□ 0.35
HMGB3-205ENST00000455596 TSPAN9O75954 239 aa17.23■□□□□ 0.35
HMGB3-205ENST00000455596 OR2H2O95918 312 aa17.23■□□□□ 0.35
HMGB3-205ENST00000455596 ARG1P05089 322 aa17.23■□□□□ 0.35
HMGB3-205ENST00000455596 MYL12AP19105 171 aa17.23■□□□□ 0.35
HMGB3-205ENST00000455596 ERP29P30040 261 aaKnown RBP17.23■□□□□ 0.35
HMGB3-205ENST00000455596 OR3A1P47881 315 aa17.23■□□□□ 0.35
HMGB3-205ENST00000455596 CDK5R1Q15078 307 aa17.23■□□□□ 0.35
HMGB3-205ENST00000455596 OR2G6Q5TZ20 316 aa17.23■□□□□ 0.35
HMGB3-205ENST00000455596 CPNE2Q96FN4 548 aaPredicted RBP17.23■□□□□ 0.35
HMGB3-205ENST00000455596 DIMT1Q9UNQ2 313 aaKnown RBP17.23■□□□□ 0.35
HMGB3-205ENST00000455596 EXOSC1Q9Y3B2 195 aaKnown RBP17.23■□□□□ 0.35
HMGB3-205ENST00000455596 TBL2Q9Y4P3 447 aaKnown RBP17.23■□□□□ 0.35
HMGB3-205ENST00000455596 FAM90A8PA6NJQ4 464 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 CLPXO76031 633 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 CD2P06729 351 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 ZNF44P15621 663 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 RAB3AP20336 220 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 LMO1P25800 156 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 PAX6P26367 422 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 SOX2P48431 317 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 PROK1P58294 105 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 ZP1P60852 638 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 ADARB1P78563 741 aaKnown RBP17.22■□□□□ 0.35
HMGB3-205ENST00000455596 IL18R1Q13478 541 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 MED21Q13503 144 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 LY6EQ16553 131 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 ZNF626Q68DY1 528 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 XAF1Q6GPH4 301 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 LHFPL4Q7Z7J7 247 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 TRAPPC6BQ86SZ2 158 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 OR11H6Q8NGC7 330 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 RPS4Y2Q8TD47 263 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 GPR148Q8TDV2 347 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 CITED1Q99966 193 aa17.22■□□□□ 0.35
HMGB3-205ENST00000455596 FUOMA2VDF0 154 aa17.21■□□□□ 0.35
HMGB3-205ENST00000455596 ODF3BA8MYP8 253 aa17.21■□□□□ 0.35
HMGB3-205ENST00000455596 P2RX3P56373 397 aa17.21■□□□□ 0.35
HMGB3-205ENST00000455596 SCN1BQ07699 218 aa17.21■□□□□ 0.35
HMGB3-205ENST00000455596 CHST4Q8NCG5 386 aa17.21■□□□□ 0.35
HMGB3-205ENST00000455596 RGP1Q92546 391 aaPredicted RBP17.21■□□□□ 0.35
HMGB3-205ENST00000455596 FOXRED1Q96CU9 486 aaPredicted RBP17.21■□□□□ 0.35
HMGB3-205ENST00000455596 TMEM80Q96HE8 168 aa17.21■□□□□ 0.35
HMGB3-205ENST00000455596 GPER1Q99527 375 aa17.21■□□□□ 0.35
HMGB3-205ENST00000455596 CHCHD3Q9NX63 227 aaKnown RBP17.21■□□□□ 0.35
HMGB3-205ENST00000455596 UBE2J1Q9Y385 318 aaPredicted RBP17.21■□□□□ 0.35
HMGB3-205ENST00000455596 SESN1Q9Y6P5 492 aa17.21■□□□□ 0.35
HMGB3-205ENST00000455596 HSPE1-MOB4S4R3N1 261 aa17.21■□□□□ 0.35
HMGB3-205ENST00000455596 MTNR1BP49286 362 aa17.2■□□□□ 0.34
HMGB3-205ENST00000455596 DYNC1I2Q13409 638 aaKnown RBP17.2■□□□□ 0.34
HMGB3-205ENST00000455596 ZNF529Q6P280 563 aa17.2■□□□□ 0.34
HMGB3-205ENST00000455596 SATL1Q86VE3 508 aa17.2■□□□□ 0.34
HMGB3-205ENST00000455596 PXT1Q8NFP0 134 aa17.2■□□□□ 0.34
HMGB3-205ENST00000455596 MALSU1Q96EH3 234 aa17.2■□□□□ 0.34
HMGB3-205ENST00000455596 RAB18Q9NP72 206 aa17.2■□□□□ 0.34
HMGB3-205ENST00000455596 BABAM2Q9NXR7 383 aa17.2■□□□□ 0.34
HMGB3-205ENST00000455596 TAS2R4Q9NYW5 299 aa17.2■□□□□ 0.34
HMGB3-205ENST00000455596 NBEAL1Q6ZS30 2694 aa17.2■□□□□ 0.34
HMGB3-205ENST00000455596 A0A0G2JK05 382 aa17.19■□□□□ 0.34
HMGB3-205ENST00000455596 OGG1O15527 345 aa17.19■□□□□ 0.34
HMGB3-205ENST00000455596 KRTAP10-3P60369 221 aa17.19■□□□□ 0.34
HMGB3-205ENST00000455596 SLC35E4Q6ICL7 350 aa17.19■□□□□ 0.34
HMGB3-205ENST00000455596 Q6P435 159 aa17.19■□□□□ 0.34
HMGB3-205ENST00000455596 TREML4Q6UXN2 200 aa17.19■□□□□ 0.34
HMGB3-205ENST00000455596 LIAT1Q6ZQX7 453 aa17.19■□□□□ 0.34
HMGB3-205ENST00000455596 OR51A2Q8NGJ7 313 aa17.19■□□□□ 0.34
HMGB3-205ENST00000455596 OR52N1Q8NH53 320 aa17.19■□□□□ 0.34
HMGB3-205ENST00000455596 TMEM106AQ96A25 262 aa17.19■□□□□ 0.34
HMGB3-205ENST00000455596 SMIM19Q96E16 107 aa17.19■□□□□ 0.34
HMGB3-205ENST00000455596 GAL3ST2Q9H3Q3 398 aa17.19■□□□□ 0.34
HMGB3-205ENST00000455596 TRGV10A0A0A0MS01 117 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 VGLL3A8MV65 326 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 SLC33A1O00400 549 aaPredicted RBP17.18■□□□□ 0.34
HMGB3-205ENST00000455596 GABRPO00591 440 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 TIMM23O14925 209 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 CASQ2O14958 399 aaPredicted RBP17.18■□□□□ 0.34
HMGB3-205ENST00000455596 DEGS1O15121 323 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 CSN2P05814 226 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 CAPGP40121 348 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 AESQ08117 197 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 OGFRL1Q5TC84 451 aaPredicted RBP17.18■□□□□ 0.34
HMGB3-205ENST00000455596 ELP2Q6IA86 826 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 ASPHD2Q6ICH7 369 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 C8orf59Q8N0T1 100 aaPredicted RBP17.18■□□□□ 0.34
HMGB3-205ENST00000455596 DYNAPQ8N1N2 210 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 TNFAIP8L1Q8WVP5 186 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 GGHQ92820 318 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 CLEC7AQ9BXN2 247 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 TMEM133Q9H2Q1 129 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 FBLN5Q9UBX5 448 aa17.18■□□□□ 0.34
HMGB3-205ENST00000455596 CLEC2DQ9UHP7 191 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms