RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 SIGLEC9Q9Y336 463 aa14.34□□□□□ -0.11
DDX56-207ENST00000448192 TBL2Q9Y4P3 447 aaKnown RBP14.34□□□□□ -0.11
DDX56-207ENST00000448192 PCDHGB5Q9Y5G0 923 aa14.34□□□□□ -0.11
DDX56-207ENST00000448192 ODF3BA8MYP8 253 aa14.33□□□□□ -0.12
DDX56-207ENST00000448192 SULT1B1O43704 296 aa14.33□□□□□ -0.12
DDX56-207ENST00000448192 KDM4BO94953 1096 aa14.33□□□□□ -0.12
DDX56-207ENST00000448192 OR2H2O95918 312 aa14.33□□□□□ -0.12
DDX56-207ENST00000448192 RPSAP08865 295 aaKnown RBP14.33□□□□□ -0.12
DDX56-207ENST00000448192 TMEM225BP0DP42 221 aa14.33□□□□□ -0.12
DDX56-207ENST00000448192 OR3A1P47881 315 aa14.33□□□□□ -0.12
DDX56-207ENST00000448192 RAB13P51153 203 aa14.33□□□□□ -0.12
DDX56-207ENST00000448192 SSX2Q16385 188 aa14.33□□□□□ -0.12
DDX56-207ENST00000448192 SMN1Q16637 294 aaKnown RBP14.33□□□□□ -0.12
DDX56-207ENST00000448192 ZNF626Q68DY1 528 aa14.33□□□□□ -0.12
DDX56-207ENST00000448192 CRIP3Q6Q6R5 217 aa14.33□□□□□ -0.12
DDX56-207ENST00000448192 OR11H6Q8NGC7 330 aa14.33□□□□□ -0.12
DDX56-207ENST00000448192 PIFOQ8TCI5 191 aa14.33□□□□□ -0.12
DDX56-207ENST00000448192 FOXRED1Q96CU9 486 aaPredicted RBP14.33□□□□□ -0.12
DDX56-207ENST00000448192 NKX3-1Q99801 234 aaPredicted RBP14.33□□□□□ -0.12
DDX56-207ENST00000448192 ABCB10Q9NRK6 738 aa14.33□□□□□ -0.12
DDX56-207ENST00000448192 MRPS18AQ9NVS2 196 aaKnown RBP14.33□□□□□ -0.12
DDX56-207ENST00000448192 SMPD3Q9NY59 655 aaPredicted RBP14.33□□□□□ -0.12
DDX56-207ENST00000448192 CHST1O43916 411 aa14.32□□□□□ -0.12
DDX56-207ENST00000448192 WBP4O75554 376 aaKnown RBP14.32□□□□□ -0.12
DDX56-207ENST00000448192 ZNF44P15621 663 aa14.32□□□□□ -0.12
DDX56-207ENST00000448192 GTF2A1P52655 376 aaPredicted RBP14.32□□□□□ -0.12
DDX56-207ENST00000448192 P2RX3P56373 397 aa14.32□□□□□ -0.12
DDX56-207ENST00000448192 KISS1Q15726 138 aa14.32□□□□□ -0.12
DDX56-207ENST00000448192 ZSCAN26Q16670 478 aa14.32□□□□□ -0.12
DDX56-207ENST00000448192 SAXO1Q8IYX7 474 aa14.32□□□□□ -0.12
DDX56-207ENST00000448192 MALSU1Q96EH3 234 aa14.32□□□□□ -0.12
DDX56-207ENST00000448192 SESN1Q9Y6P5 492 aa14.32□□□□□ -0.12
DDX56-207ENST00000448192 TET2Q6N021 2002 aaPredicted RBP14.32□□□□□ -0.12
DDX56-207ENST00000448192 KIAA2026Q5HYC2 2103 aa14.32□□□□□ -0.12
DDX56-207ENST00000448192 KCNAB3O43448 404 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 LIMS3P0CW19 117 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 LIMS4P0CW20 117 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 ERP29P30040 261 aaKnown RBP14.31□□□□□ -0.12
DDX56-207ENST00000448192 KIR2DS4P43632 304 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 AESQ08117 197 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 IL18R1Q13478 541 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 LRRC36Q1X8D7 754 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 LDLRAD2Q5SZI1 272 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 LPCAT4Q643R3 524 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 LIAT1Q6ZQX7 453 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 PARP16Q8N5Y8 322 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 OR2T6Q8NHC8 308 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 RDH12Q96NR8 316 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 NPFFR1Q9GZQ6 430 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 TMEM133Q9H2Q1 129 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 MMP27Q9H306 513 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 RHOFQ9HBH0 211 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 FGF20Q9NP95 211 aaPredicted RBP14.31□□□□□ -0.12
DDX56-207ENST00000448192 ING3Q9NXR8 418 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 UBE2J1Q9Y385 318 aaPredicted RBP14.31□□□□□ -0.12
DDX56-207ENST00000448192 HILPDAQ9Y5L2 63 aa14.31□□□□□ -0.12
DDX56-207ENST00000448192 TRGV10A0A0A0MS01 117 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 IGHV2-26A0A0B4J1V2 119 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 A0A0G2JK05 382 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 FUOMA2VDF0 154 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 VGLL3A8MV65 326 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 ALX3O95076 343 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 CLIC3O95833 236 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 GLIPR1P48060 266 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 SOX2P48431 317 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 ETV1P50549 477 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 EFNB2P52799 333 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 ZP1P60852 638 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 ZNF691Q5VV52 312 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 SATL1Q86VE3 508 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 NDNFQ8TB73 568 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 CNIH3Q8TBE1 160 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 RPS4Y2Q8TD47 263 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 HAVCR2Q8TDQ0 301 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 CYGBQ8WWM9 190 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 GPER1Q99527 375 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 CLEC7AQ9BXN2 247 aa14.3□□□□□ -0.12
DDX56-207ENST00000448192 RANBP3Q9H6Z4 567 aaPredicted RBP14.3□□□□□ -0.12
DDX56-207ENST00000448192 WNK1Q9H4A3 2382 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 DEGS1O15121 323 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 MAGEB3O15480 346 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 MMP23AO75900 390 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 TSPAN15O95858 294 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 RAB3AP20336 220 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 LMO1P25800 156 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 DEFA6Q01524 100 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 SLC34A1Q06495 639 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 PRAMEF5Q5TYX0 476 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 XAF1Q6GPH4 301 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 TMPRSS11AQ6ZMR5 421 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 Q6ZTK2 550 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 TMEM219Q86XT9 240 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 NR1H4Q96RI1 486 aaPredicted RBP14.29□□□□□ -0.12
DDX56-207ENST00000448192 JAM3Q9BX67 310 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 GAL3ST2Q9H3Q3 398 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 FOXJ3Q9UPW0 622 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 TCF19Q9Y242 345 aa14.29□□□□□ -0.12
DDX56-207ENST00000448192 SLC33A1O00400 549 aaPredicted RBP14.28□□□□□ -0.12
DDX56-207ENST00000448192 JUNBP17275 347 aaPredicted RBP14.28□□□□□ -0.12
DDX56-207ENST00000448192 CDK2P24941 298 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms