RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 SEC61A1P61619 476 aaKnown RBP6.97□□□□□ -1.29
CCDC39-201ENST00000442201 FAM3AP98173 230 aa6.97□□□□□ -1.29
CCDC39-201ENST00000442201 IL18Q14116 193 aa6.97□□□□□ -1.29
CCDC39-201ENST00000442201 UBE2NLQ5JXB2 153 aa6.97□□□□□ -1.29
CCDC39-201ENST00000442201 C1orf100Q5SVJ3 147 aa6.97□□□□□ -1.29
CCDC39-201ENST00000442201 FAM166AQ6J272 317 aa6.97□□□□□ -1.29
CCDC39-201ENST00000442201 C1QL4Q86Z23 238 aa6.97□□□□□ -1.29
CCDC39-201ENST00000442201 OR51D1Q8NGF3 324 aa6.97□□□□□ -1.29
CCDC39-201ENST00000442201 OR52N4Q8NGI2 321 aa6.97□□□□□ -1.29
CCDC39-201ENST00000442201 MAFIPQ8WZ33 124 aa6.97□□□□□ -1.29
CCDC39-201ENST00000442201 CDH20Q9HBT6 801 aa6.97□□□□□ -1.29
CCDC39-201ENST00000442201 Q9UFV3 132 aa6.97□□□□□ -1.29
CCDC39-201ENST00000442201 AMDHD2Q9Y303 409 aa6.97□□□□□ -1.29
CCDC39-201ENST00000442201 ZZEF1O43149 2961 aa6.97□□□□□ -1.29
CCDC39-201ENST00000442201 RTTNQ86VV8 2226 aa6.96□□□□□ -1.29
CCDC39-201ENST00000442201 TRGV8A0A0C4DH27 118 aa6.96□□□□□ -1.29
CCDC39-201ENST00000442201 PSMB1P20618 241 aaKnown RBP6.96□□□□□ -1.29
CCDC39-201ENST00000442201 ACKR3P25106 362 aa6.96□□□□□ -1.29
CCDC39-201ENST00000442201 MADCAM1Q13477 382 aa6.96□□□□□ -1.29
CCDC39-201ENST00000442201 MPPED2Q15777 294 aa6.96□□□□□ -1.29
CCDC39-201ENST00000442201 MRPL21Q7Z2W9 205 aaKnown RBP6.96□□□□□ -1.29
CCDC39-201ENST00000442201 OR5AS1Q8N127 324 aa6.96□□□□□ -1.29
CCDC39-201ENST00000442201 ST6GALNAC3Q8NDV1 305 aa6.96□□□□□ -1.29
CCDC39-201ENST00000442201 OR10A7Q8NGE5 316 aa6.96□□□□□ -1.29
CCDC39-201ENST00000442201 OR5L1Q8NGL2 311 aa6.96□□□□□ -1.29
CCDC39-201ENST00000442201 FAM3DQ96BQ1 224 aa6.96□□□□□ -1.29
CCDC39-201ENST00000442201 VKORC1Q9BQB6 163 aa6.96□□□□□ -1.29
CCDC39-201ENST00000442201 STARD10Q9Y365 291 aa6.96□□□□□ -1.29
CCDC39-201ENST00000442201 A8MWP6 167 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 J3QW42 95 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 M0QZK8 103 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 NGFP01138 241 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 IGKV3-15P01624 115 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 GSTP1P09211 210 aaKnown RBP6.96□□□□□ -1.3
CCDC39-201ENST00000442201 ZNF93P35789 620 aaPredicted RBP6.96□□□□□ -1.3
CCDC39-201ENST00000442201 WNT5AP41221 380 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 CDX1P47902 265 aaPredicted RBP6.96□□□□□ -1.3
CCDC39-201ENST00000442201 ART1P52961 327 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 OR8B8Q15620 311 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 TMEM211Q6ICI0 200 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 MRGPRGQ86SM5 289 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 LYPD6Q86Y78 171 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 PAQR4Q8N4S7 273 aaPredicted RBP6.96□□□□□ -1.3
CCDC39-201ENST00000442201 RAB40AQ8WXH6 277 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 NKX3-1Q99801 234 aaPredicted RBP6.96□□□□□ -1.3
CCDC39-201ENST00000442201 ADAT1Q9BUB4 502 aaKnown RBP6.96□□□□□ -1.3
CCDC39-201ENST00000442201 TUBA4BQ9H853 241 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 IGKV1-9A0A0C4DH69 117 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 LOC100289279A0A1B0GTE1 492 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 PRAF2O60831 178 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 AGFG2O95081 481 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 BPNT1O95861 308 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 MT-ND4LP03901 98 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 CELA3BP08861 270 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 PRSS12P56730 875 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 C2orf76Q3KRA6 126 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 AKIRIN2Q53H80 203 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 TIMM23BQ5SRD1 257 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 ZNF57Q68EA5 555 aaPredicted RBP6.96□□□□□ -1.3
CCDC39-201ENST00000442201 ZNF101Q8IZC7 436 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 CMTM4Q8IZR5 234 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 SYNPRQ8TBG9 265 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 RND1Q92730 232 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 SLC25A28Q96A46 364 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 SLC25A38Q96DW6 304 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 S100A16Q96FQ6 103 aaKnown RBP6.96□□□□□ -1.3
CCDC39-201ENST00000442201 NOL4LQ96MY1 436 aaPredicted RBP6.96□□□□□ -1.3
CCDC39-201ENST00000442201 TMEM208Q9BTX3 173 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 REPIN1Q9BWE0 567 aaKnown RBP6.96□□□□□ -1.3
CCDC39-201ENST00000442201 ABCG5Q9H222 651 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 CNTD2Q9H8S5 307 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 SMCO4Q9NRQ5 59 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 ZDHHC8Q9ULC8 765 aa6.96□□□□□ -1.3
CCDC39-201ENST00000442201 TPRP12270 2363 aaKnown RBP6.96□□□□□ -1.3
CCDC39-201ENST00000442201 ARHGAP21Q5T5U3 1957 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 A0A1W2PN81 502 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 NUDT19A8MXV4 375 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 DIRAS3O95661 229 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 OPN1MWP04001 364 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 CD3GP09693 182 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 UBBP0CG47 229 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 OPN1MW2P0DN77 364 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 OPN1MW3P0DN78 364 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 CHRNA7P36544 502 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 PITPNBP48739 271 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 INPP1P49441 399 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 RPS27AP62979 156 aaKnown RBP6.95□□□□□ -1.3
CCDC39-201ENST00000442201 UBA52P62987 128 aaKnown RBP6.95□□□□□ -1.3
CCDC39-201ENST00000442201 UBE2V2Q15819 145 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 CHRFAM7AQ494W8 412 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 STEAP2Q8NFT2 490 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 OR4D6Q8NGJ1 314 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 OR5R1Q8NH85 324 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 SPACA5Q96QH8 159 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 GPER1Q99527 375 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 ZNF816-ZNF321PA0A0X1KG74 233 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 GGT3PA6NGU5 568 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 LANCL1O43813 399 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 MAS1LP35410 378 aa6.95□□□□□ -1.3
CCDC39-201ENST00000442201 CNN3Q15417 329 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms