RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 CTDSP2O14595 271 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 SULT1B1O43704 296 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 GMDSO60547 372 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 MTRF1O75570 445 aaKnown RBP3.97□□□□□ -1.77
PTPN4-206ENST00000441089 PAHP00439 452 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 CST4P01036 141 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 NRASP01111 189 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 CRYAAP02489 173 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 CRYBA1P05813 215 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 CD2P06729 351 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 CSF1P09603 554 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 ZNF12P17014 697 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 KITLGP21583 273 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 CFL1P23528 166 aaKnown RBP3.97□□□□□ -1.77
PTPN4-206ENST00000441089 PAX7P23759 505 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 AZGP1P25311 298 aaKnown RBP3.97□□□□□ -1.77
PTPN4-206ENST00000441089 BDKRB2P30411 391 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 GNALP38405 381 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 PPOXP50336 477 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 RORCP51449 518 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 MMP15P51511 669 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 BMXP51813 675 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 RAG2P55895 527 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 CLDN12P56749 244 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 CD69Q07108 199 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 RIPPLY1Q0D2K3 151 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 MALLQ13021 153 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 PRDX4Q13162 271 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 P2RY14Q15391 338 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 DGUOKQ16854 277 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 C21orf62-AS1Q17RA5 79 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 ZNF404Q494X3 552 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 C1orf100Q5SVJ3 147 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 HES5Q5TA89 166 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 MBNL2Q5VZF2 373 aaKnown RBP3.97□□□□□ -1.77
PTPN4-206ENST00000441089 SFXN4Q6P4A7 337 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 C16orf87Q6PH81 154 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 MOB3CQ70IA8 216 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 PGAP1Q75T13 922 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 UTS2BQ765I0 119 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 TPRA1Q86W33 373 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 SERPINA12Q8IW75 414 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 KIR3DL3Q8N743 410 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 BHLHE23Q8NDY6 225 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 NUP37Q8NFH4 326 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 OR4D6Q8NGJ1 314 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 OR5L1Q8NGL2 311 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 OR6Q1Q8NGQ2 317 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 MCFD2Q8NI22 146 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 TRMT10AQ8TBZ6 339 aaKnown RBP3.97□□□□□ -1.77
PTPN4-206ENST00000441089 NPRL2Q8WTW4 380 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 C22orf15Q8WYQ4 148 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 PIGCQ92535 297 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 THRSPQ92748 146 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 C10orf35Q96D05 121 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 HAVCR1Q96D42 359 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 RBMXL1Q96E39 390 aaKnown RBP3.97□□□□□ -1.77
PTPN4-206ENST00000441089 CYYR1Q96J86 154 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 MIXL1Q9H2W2 232 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 MOV10Q9HCE1 1003 aaKnown RBP3.97□□□□□ -1.77
PTPN4-206ENST00000441089 ING3Q9NXR8 418 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 OR5V1Q9UGF6 321 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 DAPK2Q9UIK4 370 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 ZNF391Q9UJN7 358 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 PURGQ9UJV8 347 aaKnown RBP3.97□□□□□ -1.77
PTPN4-206ENST00000441089 V9GY05 133 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 HERC2O95714 4834 aa3.97□□□□□ -1.77
PTPN4-206ENST00000441089 MUC4Q99102 2169 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 IGKV1-12A0A0C4DH73 117 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 A0A1B0GWJ7 208 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 PQLC2LA1A4F0 135 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 ZSCAN5BA6NJL1 495 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 ANXA2P2A6NMY6 339 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 AIPO00170 330 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 SLC17A2O00624 439 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 PDCD5O14737 125 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 LDLRAD4O15165 306 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 MLNRO43193 412 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 HOXA3O43365 443 aaPredicted RBP3.96□□□□□ -1.78
PTPN4-206ENST00000441089 CLPXO76031 633 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 IGKV1D-12P01611 117 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 OPN1MWP04001 364 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 ALDOBP05062 364 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 OPN1MW2P0DN77 364 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 OPN1MW3P0DN78 364 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF250P15622 560 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 RAB3AP20336 220 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 CA6P23280 308 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 OMGP23515 440 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 GLRXP35754 106 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 SERPINF1P36955 418 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 RAD52P43351 418 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 OR3A4PP47883 348 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 EFNB2P52799 333 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 ZP1P60852 638 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 PPP3R1P63098 170 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 QRFPP83859 136 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 PDCD1Q15116 288 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 ADIPOQQ15848 244 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 MST1LQ2TV78 715 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms