RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PI3P19957 117 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 S100A1P23297 94 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 GLRA1P23415 457 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 NHLH1Q02575 133 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 PSG7Q13046 419 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 IKZF1Q13422 519 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 TMEM65Q6PI78 240 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 KCTD9Q7L273 389 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 WDR86Q86TI4 376 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 Q8IYB0 196 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 C1orf174Q8IYL3 243 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 FAM58AQ8N1B3 248 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 ZNF680Q8NEM1 530 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 COQ8AQ8NI60 647 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 KLF14Q8TD94 323 aaPredicted RBP10.04□□□□□ -0.8
SMAD3-202ENST00000439724 ABHD17AQ96GS6 310 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 SLX1AQ9BQ83 275 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 ADAT1Q9BUB4 502 aaKnown RBP10.04□□□□□ -0.8
SMAD3-202ENST00000439724 PDCD10Q9BUL8 212 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 C1QTNF6Q9BXI9 259 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 BCL2L14Q9BZR8 327 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 FXYD6Q9H0Q3 95 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 LIME1Q9H400 295 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 RAB18Q9NP72 206 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 LUZP4Q9P127 313 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 IL36RNQ9UBH0 155 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 POLDIP2Q9Y2S7 368 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 SLC25A15Q9Y619 301 aa10.04□□□□□ -0.8
SMAD3-202ENST00000439724 IGHV1-18A0A0C4DH31 117 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 K7ENP7 123 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 KITLGP21583 273 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 CEACAM8P31997 349 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-202ENST00000439724 MPV17P39210 176 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 HTR2BP41595 481 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 GLP1RP43220 463 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 UCP3P55916 312 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 ERVK11-1P61568 191 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 SLC9A3R2Q15599 337 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 ALKBH6Q3KRA9 238 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 GSG1LQ6UXU4 331 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 DPCDQ9BVM2 203 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-202ENST00000439724 SFXN3Q9BWM7 321 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 RIMS4Q9H426 269 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-202ENST00000439724 CHMP1AQ9HD42 196 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-202ENST00000439724 Q9N2K0 584 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 COMMD9Q9P000 198 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 PURGQ9UJV8 347 aaKnown RBP10.03□□□□□ -0.8
SMAD3-202ENST00000439724 TP53TG5Q9Y2B4 290 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 MSRB2Q9Y3D2 182 aa10.03□□□□□ -0.8
SMAD3-202ENST00000439724 TRBV6-6A0A0A6YYG2 114 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 IGHV2OR16-5A0A0B4J2B6 119 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 NOS1APO75052 506 aaPredicted RBP10.02□□□□□ -0.8
SMAD3-202ENST00000439724 RHBDL1O75783 438 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 IFNA7P01567 189 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 ACAA1P09110 424 aaPredicted RBP10.02□□□□□ -0.8
SMAD3-202ENST00000439724 S100A11P31949 105 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 SERPINF1P36955 418 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 TDGF1P3P51864 188 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 CYCSP99999 105 aaKnown RBP10.02□□□□□ -0.8
SMAD3-202ENST00000439724 OR8G1Q15617 311 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 TBR1Q16650 682 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 ANKRD55Q3KP44 614 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 C3orf36Q3SXR2 165 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 TIMM23BQ5SRD1 257 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 C1QTNF12Q5T7M4 302 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 C11orf87Q6NUJ2 197 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 ZNF474Q6S9Z5 364 aaPredicted RBP10.02□□□□□ -0.8
SMAD3-202ENST00000439724 TMUB2Q71RG4 321 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 RPRMLQ8N4K4 120 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 SCCPDHQ8NBX0 429 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 OR8G5Q8NG78 346 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 MOB3AQ96BX8 217 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 PIK3IP1Q96FE7 263 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 ZNF488Q96MN9 340 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 NMES1Q9C002 83 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 WDR13Q9H1Z4 485 aa10.02□□□□□ -0.8
SMAD3-202ENST00000439724 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.02□□□□□ -0.81
SMAD3-202ENST00000439724 CRYM-AS1A6NIL9 109 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 POM121CA8CG34 1229 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 GFRA3O60609 400 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 KNG1P01042 644 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 IFNA2P01563 188 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 PGA5P0DJD9 388 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 ZNF728P0DKX0 622 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 FCGR2CP31995 323 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 ZNF154Q13106 437 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 EXOSC2Q13868 293 aaKnown RBP10.02□□□□□ -0.81
SMAD3-202ENST00000439724 RBM39Q14498 530 aaKnown RBP10.02□□□□□ -0.81
SMAD3-202ENST00000439724 MBNL2Q5VZF2 373 aaKnown RBP10.02□□□□□ -0.81
SMAD3-202ENST00000439724 Q6P435 159 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 C3P1Q6ZMU1 363 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 SGPP2Q8IWX5 399 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 SUMF2Q8NBJ7 301 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 NEK7Q8TDX7 302 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 PPP1R1CQ8WVI7 109 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 SEC22AQ96IW7 307 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 NRIP2Q9BQI9 281 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 MFFQ9GZY8 342 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 TMEM100Q9NV29 134 aa10.02□□□□□ -0.81
SMAD3-202ENST00000439724 TRAV24A0A0B4J272 114 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms