RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 HLA-DRB5Q30154 266 aa9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 CCDC197Q8NCU1 140 aa9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 PROKR2Q8NFJ6 384 aa9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 MYOZ3Q8TDC0 251 aa9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 TSPEARQ8WU66 669 aa9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 RCN3Q96D15 328 aa9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 HES4Q9HCC6 221 aa9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 LINC00312Q9Y6C7 94 aa9.43□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 BBIP1A8MTZ0 92 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 NDUFAB1O14561 156 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ARPC3O15145 178 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 HSPA12AO43301 675 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 DCTN3O75935 186 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 SERPINA1P01009 418 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 CDK2P24941 298 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 KDELR2P33947 212 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 CEACAM3P40198 252 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 SELENOWP63302 87 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 RUNX1Q01196 453 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 MOB3CQ70IA8 216 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 RTN4RL2Q86UN3 420 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 OR8H2Q8N162 312 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ZNF491Q8N8L2 437 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 OR52N4Q8NGI2 321 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 GON7Q9BXV9 100 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 GHITMQ9H3K2 345 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 TUBA4BQ9H853 241 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 HSPG2P98160 4391 aa9.42□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 DNAH6Q9C0G6 4158 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 A0A1B0GVY2 172 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 FXYD1O00168 92 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 NOS1APO75052 506 aaPredicted RBP9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 IFNA14P01570 189 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 IGKV1D-33P01593 117 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 IGKV1-33P01594 117 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 SLC15A1P46059 708 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 HAAOP46952 286 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 COQ5Q5HYK3 327 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 CCDC144NLQ6NUI1 221 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 OR5A2Q8NGI9 324 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 RP9Q8TA86 221 aaKnown RBP9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 FANK1Q8TC84 345 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 UBE2E2Q96LR5 201 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 AMELYQ99218 206 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 IFT27Q9BW83 186 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 CHST6Q9GZX3 395 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ABCG5Q9H222 651 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 OR52D1Q9H346 318 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 RGCCQ9H4X1 137 aa9.41□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 UBR4Q5T4S7 5183 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 A0A1W2PPI3 338 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 F8VVB4 439 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 F8VWA3 439 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 TOR1AO14656 332 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 APOL3O95236 402 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 IGHA1P01876 353 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 SLC6A6P31641 620 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 NUDT2P50583 147 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ISL1P61371 349 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 FGD3Q5JSP0 725 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 LINC00322Q6ZN03 302 aaPredicted RBP9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 TRAPPC6BQ86SZ2 158 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 LYSMD2Q8IV50 215 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 TOMM40LQ969M1 308 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 CMTM5Q96DZ9 223 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 KCTD7Q96MP8 289 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 HSPB9Q9BQS6 159 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 ACTR3BQ9P1U1 418 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 VSIG4Q9Y279 399 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 CEPT1Q9Y6K0 416 aa9.4□□□□□ -0.9
SMAD9-IT1-201ENST00000437983 TRBV4-1A0A0J9YWV2 114 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 OR5B21A6NL26 309 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 NCBP2LA6PVI3 153 aaKnown RBP9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 OOSP1A8MZH6 123 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 J3QT63 122 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 IGLV1-51P01701 117 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 GYPBP06028 91 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 OR8U9P0C7N5 309 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 CD34P28906 385 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 PRDX6P30041 224 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 ERVK11-1P61568 191 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 EWSR1Q01844 656 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 TRIM25Q14258 630 aaKnown RBP9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 PLCXD3Q63HM9 321 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 OR52W1Q6IF63 320 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 CEMP1Q6PRD7 247 aaPredicted RBP9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 KRT74Q7RTS7 529 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 Q8N9W7 124 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 OR8B12Q8NGG6 310 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 RNF133Q8WVZ7 376 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 RPEQ96AT9 228 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 SNX22Q96L94 193 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 OR4C12Q96R67 309 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 ARL8BQ9NVJ2 186 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 GID8Q9NWU2 228 aa9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 UBE2J1Q9Y385 318 aaPredicted RBP9.39□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 NUPR2A6NF83 97 aa9.38□□□□□ -0.91
SMAD9-IT1-201ENST00000437983 IGHV3-7P01780 117 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms