RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 RBM38Q9H0Z9 239 aaKnown RBP12.78□□□□□ -0.36
CNOT9-205ENST00000433439 ING3Q9NXR8 418 aa12.78□□□□□ -0.36
CNOT9-205ENST00000433439 ZNF581Q9P0T4 197 aa12.78□□□□□ -0.36
CNOT9-205ENST00000433439 OR5V1Q9UGF6 321 aa12.78□□□□□ -0.36
CNOT9-205ENST00000433439 SMIM31A0A1B0GVY4 71 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 FAM157AC9JC47 383 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 SIGLEC5O15389 551 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 LCN2P80188 198 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 QRFPP83859 136 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 IL13RA2Q14627 380 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 ZNF146Q15072 292 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 LRRC10Q5BKY1 277 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 ATPAF1Q5TC12 328 aaPredicted RBP12.77□□□□□ -0.37
CNOT9-205ENST00000433439 ZNF561Q8N587 486 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 OR5H6Q8NGV6 325 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 NEK7Q8TDX7 302 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 H1FXQ92522 213 aaKnown RBP12.77□□□□□ -0.37
CNOT9-205ENST00000433439 MRPS24Q96EL2 167 aaKnown RBP12.77□□□□□ -0.37
CNOT9-205ENST00000433439 SDSLQ96GA7 329 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 NICN1Q9BSH3 213 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 URM1Q9BTM9 101 aaKnown RBP12.77□□□□□ -0.37
CNOT9-205ENST00000433439 SSBP3Q9BWW4 388 aaPredicted RBP12.77□□□□□ -0.37
CNOT9-205ENST00000433439 BARHL1Q9BZE3 327 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 DNTTIP1Q9H147 329 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 PPA2Q9H2U2 334 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 SLC25A10Q9UBX3 287 aaPredicted RBP12.77□□□□□ -0.37
CNOT9-205ENST00000433439 CLN8Q9UBY8 286 aa12.77□□□□□ -0.37
CNOT9-205ENST00000433439 F5H0A9 414 aaPredicted RBP12.76□□□□□ -0.37
CNOT9-205ENST00000433439 CFPP27918 469 aa12.76□□□□□ -0.37
CNOT9-205ENST00000433439 SOX6P35712 828 aa12.76□□□□□ -0.37
CNOT9-205ENST00000433439 VEGFCP49767 419 aa12.76□□□□□ -0.37
CNOT9-205ENST00000433439 EFNB2P52799 333 aa12.76□□□□□ -0.37
CNOT9-205ENST00000433439 RPS27AP62979 156 aaKnown RBP12.76□□□□□ -0.37
CNOT9-205ENST00000433439 EDDM3AQ14507 147 aa12.76□□□□□ -0.37
CNOT9-205ENST00000433439 PAN3Q58A45 887 aaKnown RBP12.76□□□□□ -0.37
CNOT9-205ENST00000433439 NKAPLQ5M9Q1 402 aa12.76□□□□□ -0.37
CNOT9-205ENST00000433439 WDR25Q64LD2 544 aaPredicted RBP12.76□□□□□ -0.37
CNOT9-205ENST00000433439 Q6P435 159 aa12.76□□□□□ -0.37
CNOT9-205ENST00000433439 BRICD5Q6PL45 260 aa12.76□□□□□ -0.37
CNOT9-205ENST00000433439 Q96M66 194 aa12.76□□□□□ -0.37
CNOT9-205ENST00000433439 DCUN1D5Q9BTE7 237 aa12.76□□□□□ -0.37
CNOT9-205ENST00000433439 LPAR5Q9H1C0 372 aa12.76□□□□□ -0.37
CNOT9-205ENST00000433439 NDUFA13Q9P0J0 144 aa12.76□□□□□ -0.37
CNOT9-205ENST00000433439 KAAG1Q9UBP8 84 aa12.76□□□□□ -0.37
CNOT9-205ENST00000433439 RAB22AQ9UL26 194 aa12.76□□□□□ -0.37
CNOT9-205ENST00000433439 CSMD1Q96PZ7 3565 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 TMEM82A0PJX8 343 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 SLC33A1O00400 549 aaPredicted RBP12.75□□□□□ -0.37
CNOT9-205ENST00000433439 LDLRAD4O15165 306 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 PSPNO60542 156 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 CR1P17927 2039 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 CPT2P23786 658 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 ITPR3Q14573 2671 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 GRK1Q15835 563 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 MPV17LQ2QL34 196 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 TMEM249Q2WGJ8 235 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 NHLRC3Q5JS37 347 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 ZNF841Q6ZN19 808 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 BPIFB2Q8N4F0 458 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 OR4S1Q8NGB4 309 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 PPP1R35Q8TAP8 253 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 POM121Q96HA1 1249 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 SNX22Q96L94 193 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 ATG5Q9H1Y0 275 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 ABRACLQ9P1F3 81 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 COMMD3Q9UBI1 195 aa12.75□□□□□ -0.37
CNOT9-205ENST00000433439 A0A0A6YYD4 124 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 TRAV24A0A0B4J272 114 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 FOXH1O75593 365 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 FCN3O75636 299 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 TK1P04183 234 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 ZNF182P17025 639 aaPredicted RBP12.74□□□□□ -0.37
CNOT9-205ENST00000433439 BLVRBP30043 206 aaPredicted RBP12.74□□□□□ -0.37
CNOT9-205ENST00000433439 OR3A1P47881 315 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 EDDM3BP56851 147 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 ATXN7L3Q14CW9 347 aaPredicted RBP12.74□□□□□ -0.37
CNOT9-205ENST00000433439 FOXB2Q5VYV0 432 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 RAB12Q6IQ22 244 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 SPNS3Q6ZMD2 512 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 GDPD3Q7L5L3 318 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 LINC00596Q86U02 117 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 SUMF2Q8NBJ7 301 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 OR4M1Q8NGD0 313 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 DYNC2LI1Q8TCX1 351 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 DGCR14Q96DF8 476 aaKnown RBP12.74□□□□□ -0.37
CNOT9-205ENST00000433439 NEDD4LQ96PU5 975 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 TM2D1Q9BX74 207 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 PEX16Q9Y5Y5 336 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 ETV7Q9Y603 341 aa12.74□□□□□ -0.37
CNOT9-205ENST00000433439 A0A075B6Q4 140 aa12.73□□□□□ -0.37
CNOT9-205ENST00000433439 MEX3AA1L020 520 aaKnown RBP12.73□□□□□ -0.37
CNOT9-205ENST00000433439 METTL21EPA6NDL7 271 aa12.73□□□□□ -0.37
CNOT9-205ENST00000433439 K7N7A8 449 aa12.73□□□□□ -0.37
CNOT9-205ENST00000433439 SOCS1O15524 211 aa12.73□□□□□ -0.37
CNOT9-205ENST00000433439 ZNF737O75373 536 aa12.73□□□□□ -0.37
CNOT9-205ENST00000433439 IGHV4-31P0DP07 118 aa12.73□□□□□ -0.37
CNOT9-205ENST00000433439 RAB6AP20340 208 aa12.73□□□□□ -0.37
CNOT9-205ENST00000433439 ZFP36P26651 326 aaKnown RBP12.73□□□□□ -0.37
CNOT9-205ENST00000433439 GZMKP49863 264 aa12.73□□□□□ -0.37
CNOT9-205ENST00000433439 NPY4RP50391 375 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms