RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 IGSF10Q6WRI0 2623 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 HECTD1Q9ULT8 2610 aa1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 COL11A1P12107 1806 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P27-201ENST00000431429 MYH2Q9UKX2 1941 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 LOC400499M0QZD8 3231 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 SCN10AQ9Y5Y9 1956 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 NOTCH2Q04721 2471 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 DYSFO75923 2080 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 URB1O60287 2271 aaKnown RBP1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 IGKV2D-24A0A075B6R9 120 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 TRAV19A0A0A6YYK7 116 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 IGKV6-21A0A0C4DH24 114 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 SPRR5A0A1B0GTR4 108 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 ANKRD20A5PA0PJZ0 165 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 VPS37CA5D8V6 355 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 OR5H1A6NKK0 313 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 RFXANKO14593 260 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 CHST10O43529 356 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 TRAPPC3O43617 180 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 GATCO43716 136 aaKnown RBP1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 MPZL1O95297 269 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 SMC2O95347 1197 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 PTHP01270 115 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 MT-ND4P03905 459 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 RHOXF2BP0C7M4 288 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 OR56A5P0C7T3 313 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZNF688P0C7X2 276 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 BGNP21810 368 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 PCK1P35558 622 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 ARL2P36404 184 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 TALDO1P37837 337 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 RPL31P62899 125 aaKnown RBP1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 CYP24A1Q07973 514 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 INCA1Q0VD86 236 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZNF816Q0VGE8 651 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 ST3GAL4Q11206 333 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 C18orf21Q32NC0 220 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 LINC00303Q3SY05 128 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 C6orf99Q4VX62 202 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 TEX30Q5JUR7 227 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 CLLU1OSQ5K130 101 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 PID1Q7Z2X4 250 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 OR1J4Q8NGS1 313 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 OR51A7Q8NH64 312 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 LILRB4Q8NHJ6 448 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 ENKURQ8TC29 256 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 RXFP2Q8WXD0 754 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 TMIGD2Q96BF3 282 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 CENPNQ96H22 339 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 MBOAT7Q96N66 472 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 TSNAXQ99598 290 aaKnown RBP1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 RSG1Q9BU20 258 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 CHCHD7Q9BUK0 85 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 SFXN3Q9BWM7 321 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 CSNK1G1Q9HCP0 422 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 LZTFL1Q9NQ48 299 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 NRBP2Q9NSY0 501 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 IFNKQ9P0W0 207 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 ACOT9Q9Y305 439 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 HES2Q9Y543 173 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 KIAA1671Q9BY89 1806 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZBED9Q6R2W3 1325 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 KIF26AQ9ULI4 1882 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 COL1A2P08123 1366 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 IGF2RP11717 2491 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 DOPEY1Q5JWR5 2465 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 MICAL3Q7RTP6 2002 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 ANKRD17O75179 2603 aaKnown RBP1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 TEX15Q9BXT5 2789 aa1.81□□□□□ -2.12
HMGB1P27-201ENST00000431429 KALRNO60229 2985 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 FREM2Q5SZK8 3169 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 SPTAN1Q13813 2472 aaKnown RBP1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 SPEF2Q9C093 1822 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 TEP1Q99973 2627 aaKnown RBP1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 TRIP11Q15643 1979 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 IGLV4-60A0A075B6I1 120 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 IGHV6-1A0A0B4J1U7 121 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 NDUFC2-KCTD14E9PQ53 114 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 PRMT5O14744 637 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 CCL16O15467 120 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 RNF113AO15541 343 aaKnown RBP1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZMPSTE24O75844 475 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 VAMP5O95183 116 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 PAHP00439 452 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 CCL2P13500 99 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 ME2P23368 584 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 HTR2CP28335 458 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 NUP62P37198 522 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 HADHBP55084 474 aaKnown RBP1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 TAS2R60P59551 318 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 SLC35A1P78382 337 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 IFITM3Q01628 133 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 DYNC1I2Q13409 638 aaKnown RBP1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 DMC1Q14565 340 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 SLC25A35Q3KQZ1 300 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZFP1Q6P2D0 407 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 OPN5Q6U736 354 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 Q6ZS52 159 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 FAM19A1Q7Z5A9 133 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 SETD3Q86TU7 594 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms