RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SOX8P57073 446 aa11.78□□□□□ -0.52
THBS3-202ENST00000428962 FXYD4P59646 89 aa11.78□□□□□ -0.52
THBS3-202ENST00000428962 CLN3Q13286 438 aa11.78□□□□□ -0.52
THBS3-202ENST00000428962 ZNF585AQ6P3V2 769 aa11.78□□□□□ -0.52
THBS3-202ENST00000428962 UQCC3Q6UW78 93 aa11.78□□□□□ -0.52
THBS3-202ENST00000428962 Q6ZS49 121 aa11.78□□□□□ -0.52
THBS3-202ENST00000428962 LINC00596Q86U02 117 aa11.78□□□□□ -0.52
THBS3-202ENST00000428962 OR1K1Q8NGR3 316 aa11.78□□□□□ -0.52
THBS3-202ENST00000428962 RNF141Q8WVD5 230 aa11.78□□□□□ -0.52
THBS3-202ENST00000428962 RTN4IP1Q8WWV3 396 aaPredicted RBP11.78□□□□□ -0.52
THBS3-202ENST00000428962 SLAMF9Q96A28 289 aa11.78□□□□□ -0.52
THBS3-202ENST00000428962 CNTNAP3BQ96NU0 1288 aa11.78□□□□□ -0.52
THBS3-202ENST00000428962 CNTNAP3Q9BZ76 1288 aa11.78□□□□□ -0.52
THBS3-202ENST00000428962 PLK3Q9H4B4 646 aa11.78□□□□□ -0.52
THBS3-202ENST00000428962 ZFP57Q9NU63 452 aa11.78□□□□□ -0.52
THBS3-202ENST00000428962 ZNF503-AS2A6NEH8 195 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 KCNAB3O43448 404 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 NPBWR2P48146 333 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 FBXW9Q5XUX1 488 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 GGNBP1Q5YKI7 109 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 EIF5AL1Q6IS14 154 aaKnown RBP11.77□□□□□ -0.52
THBS3-202ENST00000428962 BRICD5Q6PL45 260 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 GLRX5Q86SX6 157 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 FAM185AQ8N0U4 392 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 LRTM2Q8N967 370 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 EXTL1Q92935 676 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 MARS2Q96GW9 593 aaKnown RBP11.77□□□□□ -0.52
THBS3-202ENST00000428962 WDYHV1Q96HA8 205 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 SLC5A7Q9GZV3 580 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 LIME1Q9H400 295 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 ZC4H2Q9NQZ6 224 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 SLC2A9Q9NRM0 540 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 CYTL1Q9NRR1 136 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 FBXO9Q9UK97 447 aaPredicted RBP11.77□□□□□ -0.52
THBS3-202ENST00000428962 MPC1Q9Y5U8 109 aa11.77□□□□□ -0.52
THBS3-202ENST00000428962 TNRC6AQ8NDV7 1962 aaKnown RBP11.77□□□□□ -0.53
THBS3-202ENST00000428962 RTTNQ86VV8 2226 aa11.77□□□□□ -0.53
THBS3-202ENST00000428962 CEP250Q9BV73 2442 aa11.77□□□□□ -0.53
THBS3-202ENST00000428962 FAM221AA4D161 298 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 OR5B21A6NL26 309 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 CD300LBA8K4G0 201 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 NUDT19A8MXV4 375 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 ZNF732B4DXR9 585 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 TEX46H3BTG2 121 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 FGF16O43320 207 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 TMEM187Q14656 261 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 TUSC1Q2TAM9 212 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 STPG2Q8N412 459 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 RSRP1Q9BUV0 290 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 DEFB127Q9H1M4 99 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 C12orf49Q9H741 205 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 ZDHHC11Q9H8X9 412 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 SPACA1Q9HBV2 294 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 PLSCR2Q9NRY7 297 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 RCC2Q9P258 522 aaKnown RBP11.76□□□□□ -0.53
THBS3-202ENST00000428962 PRSS50Q9UI38 385 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 SPEF1Q9Y4P9 236 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 SPTBN4Q9H254 2564 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 RAB19A4D1S5 217 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 MSGN1A6NI15 193 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 J3QW42 95 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 LGALS8O00214 317 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 DEDDO75618 318 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 DIRAS3O95661 229 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 OR5AC1P0C628 307 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 SRPXP78539 464 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 TGIF1Q15583 401 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 LIAT1Q6ZQX7 453 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 ZNF573Q86YE8 665 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 LGI3Q8N145 548 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 BHLHE23Q8NDY6 225 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 BCL2L2Q92843 193 aaPredicted RBP11.76□□□□□ -0.53
THBS3-202ENST00000428962 MARC2Q969Z3 335 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 MRPL24Q96A35 216 aaKnown RBP11.76□□□□□ -0.53
THBS3-202ENST00000428962 MICU1Q9BPX6 476 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 GLRX2Q9NS18 164 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 TMEM100Q9NV29 134 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 ASF1BQ9NVP2 202 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 SPRR3Q9UBC9 169 aa11.76□□□□□ -0.53
THBS3-202ENST00000428962 AHCTF1Q8WYP5 2266 aa11.75□□□□□ -0.53
THBS3-202ENST00000428962 KIR2DS1A0A191URI9 304 aa11.75□□□□□ -0.53
THBS3-202ENST00000428962 K7EPK0 472 aa11.75□□□□□ -0.53
THBS3-202ENST00000428962 NGFP01138 241 aa11.75□□□□□ -0.53
THBS3-202ENST00000428962 HOXD4P09016 255 aaPredicted RBP11.75□□□□□ -0.53
THBS3-202ENST00000428962 KIR2DS4P43632 304 aa11.75□□□□□ -0.53
THBS3-202ENST00000428962 KIR2DS1Q14954 304 aa11.75□□□□□ -0.53
THBS3-202ENST00000428962 PDCD1Q15116 288 aa11.75□□□□□ -0.53
THBS3-202ENST00000428962 ATP1A1-AS1Q5TC04 95 aa11.75□□□□□ -0.53
THBS3-202ENST00000428962 P4HA3Q7Z4N8 544 aa11.75□□□□□ -0.53
THBS3-202ENST00000428962 FAM71E2Q8N5Q1 922 aa11.75□□□□□ -0.53
THBS3-202ENST00000428962 OR5T2Q8NGG2 359 aa11.75□□□□□ -0.53
THBS3-202ENST00000428962 OR5P3Q8WZ94 311 aa11.75□□□□□ -0.53
THBS3-202ENST00000428962 GMPPAQ96IJ6 420 aaPredicted RBP11.75□□□□□ -0.53
THBS3-202ENST00000428962 FGF23Q9GZV9 251 aaPredicted RBP11.75□□□□□ -0.53
THBS3-202ENST00000428962 RIMS4Q9H426 269 aaPredicted RBP11.75□□□□□ -0.53
THBS3-202ENST00000428962 PCDHB10Q9UN67 800 aa11.75□□□□□ -0.53
THBS3-202ENST00000428962 IL18BPO95998 194 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 PPYP01298 95 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 TK1P04183 234 aa11.74□□□□□ -0.53
THBS3-202ENST00000428962 CTXN2P0C2S0 81 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms