RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 COPS3Q9UNS2 423 aa11.56□□□□□ -0.56
PDAP1-202ENST00000426447 SNX5Q9Y5X3 404 aa11.56□□□□□ -0.56
PDAP1-202ENST00000426447 SMAD5-AS1Q9Y6J3 95 aa11.56□□□□□ -0.56
PDAP1-202ENST00000426447 R4GMQ9 66 aa11.56□□□□□ -0.56
PDAP1-202ENST00000426447 IGKV1-27A0A075B6S5 117 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 LCE6AA0A183 80 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 LY6LH3BQJ8 138 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 H3BSH0 61 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 SIRPB1O00241 398 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 MAGEB4O15481 346 aaPredicted RBP11.55□□□□□ -0.56
PDAP1-202ENST00000426447 SERPINA3P01011 423 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 TMEM11P17152 192 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 PRKACAP17612 351 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 NFYBP25208 207 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 OR3A1P47881 315 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 CDK5Q00535 292 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 UBE2V2Q15819 145 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 SPATS1Q496A3 300 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 ZNF322Q6U7Q0 402 aaPredicted RBP11.55□□□□□ -0.56
PDAP1-202ENST00000426447 PLEKHG7Q6ZR37 379 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 LCNL1Q6ZST4 164 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 MEPCEQ7L2J0 689 aaKnown RBP11.55□□□□□ -0.56
PDAP1-202ENST00000426447 FAM58AQ8N1B3 248 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 TOMM40LQ969M1 308 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 HRASLS5Q96KN8 279 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 ADI1Q9BV57 179 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 DCLRE1BQ9H816 532 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 PCDHB16Q9NRJ7 776 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 RBFOX1Q9NWB1 397 aaKnown RBP11.55□□□□□ -0.56
PDAP1-202ENST00000426447 NDE1Q9NXR1 346 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 ING3Q9NXR8 418 aa11.55□□□□□ -0.56
PDAP1-202ENST00000426447 ZNF256Q9Y2P7 627 aaPredicted RBP11.55□□□□□ -0.56
PDAP1-202ENST00000426447 TENM2Q9NT68 2774 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 GNGT2O14610 69 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 SH2D1BO14796 132 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 SRSF10O75494 262 aaKnown RBP11.54□□□□□ -0.56
PDAP1-202ENST00000426447 GATBO75879 557 aaKnown RBP11.54□□□□□ -0.56
PDAP1-202ENST00000426447 OSMP13725 252 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 CD34P28906 385 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 GDNFP39905 211 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 PTGFRP43088 359 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 GLIPR1P48060 266 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 NPBWR2P48146 333 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 CDC42P60953 191 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 CXCR4P61073 352 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 AESQ08117 197 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 GK3PQ14409 553 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 ZNF146Q15072 292 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 DEFB136Q30KP8 78 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 ZNF260Q3ZCT1 412 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 TMEM236Q5W0B7 351 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 STPG2Q8N412 459 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 C5orf56Q8N8D9 126 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 OR56B4Q8NH76 319 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 CORO2AQ92828 525 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 CNN2Q99439 309 aaKnown RBP11.54□□□□□ -0.56
PDAP1-202ENST00000426447 TVP23BQ9NYZ1 205 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 SCOCQ9UIL1 159 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 GSTK1Q9Y2Q3 226 aa11.54□□□□□ -0.56
PDAP1-202ENST00000426447 TCRBV5S2A0A599 114 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 FAM90A18PA6NE21 464 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 FAM90A16PA6NEW6 464 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 FAM90A20PA6NIJ5 464 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 FAM90A9PA6NNJ1 464 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 FAM90A12PA8MX19 464 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 FAM90A5PA8MXJ8 464 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 FGF16O43320 207 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 SYT7O43581 403 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 RPP14O95059 124 aaKnown RBP11.53□□□□□ -0.56
PDAP1-202ENST00000426447 CST1P01037 141 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 RPLP1P05386 114 aaKnown RBP11.53□□□□□ -0.56
PDAP1-202ENST00000426447 FAM90A15PP0C7V4 464 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 FAM90A13PP0C7W8 464 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 FAM90A14PP0C7W9 464 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 FAM90A24PP0C7X0 464 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 BCL3P20749 454 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 POU3F4P49335 361 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 ATP1B3P54709 279 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 SCN1BQ07699 218 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 KIR2DS1Q14954 304 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 PNLIPRP3Q17RR3 467 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 CXorf66Q5JRM2 361 aaPredicted RBP11.53□□□□□ -0.56
PDAP1-202ENST00000426447 SPIN3Q5JUX0 258 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 DHFR2Q86XF0 187 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 SBSPONQ8IVN8 264 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 DRAM1Q8N682 238 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 OR9G1Q8NH87 305 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 GON7Q9BXV9 100 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 EXOSC4Q9NPD3 245 aaKnown RBP11.53□□□□□ -0.56
PDAP1-202ENST00000426447 TAGLN3Q9UI15 199 aa11.53□□□□□ -0.56
PDAP1-202ENST00000426447 AMMECR1Q9Y4X0 333 aaPredicted RBP11.53□□□□□ -0.56
PDAP1-202ENST00000426447 TRBV2A0A0J9YWF9 115 aa11.52□□□□□ -0.57
PDAP1-202ENST00000426447 CCDC182A6NF36 153 aa11.52□□□□□ -0.57
PDAP1-202ENST00000426447 ZNF670-ZNF695F2Z2N8 137 aa11.52□□□□□ -0.57
PDAP1-202ENST00000426447 ENTPD6O75354 484 aa11.52□□□□□ -0.57
PDAP1-202ENST00000426447 OR2H2O95918 312 aa11.52□□□□□ -0.57
PDAP1-202ENST00000426447 IGHG2P01859 326 aa11.52□□□□□ -0.57
PDAP1-202ENST00000426447 RBP2P50120 134 aa11.52□□□□□ -0.57
PDAP1-202ENST00000426447 MTCP1P56278 107 aa11.52□□□□□ -0.57
PDAP1-202ENST00000426447 BNIP1Q12981 228 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms