RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 FOXI3A8MTJ6 420 aaPredicted RBP12.84□□□□□ -0.35
CALD1-206ENST00000424922 GATCO43716 136 aaKnown RBP12.84□□□□□ -0.35
CALD1-206ENST00000424922 CRTAPO75718 401 aaPredicted RBP12.84□□□□□ -0.35
CALD1-206ENST00000424922 IFNA6P05013 189 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 CD34P28906 385 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 HRH1P35367 487 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 UQCRFS1P47985 274 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 ASCL1P50553 236 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 RAB14P61106 215 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 FGL1Q08830 312 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 ZNF124Q15973 351 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 OR2T2Q6IF00 324 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 OR52W1Q6IF63 320 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 FBXW12Q6X9E4 464 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 MOB3CQ70IA8 216 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 TMUB2Q71RG4 321 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 ARRDC1Q8N5I2 433 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 PAPOLGQ9BWT3 736 aaKnown RBP12.84□□□□□ -0.35
CALD1-206ENST00000424922 TM2D1Q9BX74 207 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 GSX2Q9BZM3 304 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 PPA2Q9H2U2 334 aa12.84□□□□□ -0.35
CALD1-206ENST00000424922 NKX2-6A6NCS4 301 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 CEACAM18A8MTB9 384 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 RPA2P15927 270 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 PPP3CBP16298 524 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 GNLYP22749 145 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 TAS2R31P59538 309 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 TLE1Q04724 770 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 CNN3Q15417 329 aaKnown RBP12.83□□□□□ -0.35
CALD1-206ENST00000424922 C3orf36Q3SXR2 165 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 PLCXD3Q63HM9 321 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 UNQ6126/PRO20091Q6UXV3 157 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 HOGA1Q86XE5 327 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 CSNK2A3Q8NEV1 391 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 OR4K15Q8NH41 348 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 BANF2Q9H503 90 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 GPR160Q9UJ42 338 aa12.83□□□□□ -0.35
CALD1-206ENST00000424922 HCFC1P51610 2035 aa12.83□□□□□ -0.36
CALD1-206ENST00000424922 FAM230AA0A1W2PPH8 454 aa12.83□□□□□ -0.36
CALD1-206ENST00000424922 LILRA1O75019 489 aa12.83□□□□□ -0.36
CALD1-206ENST00000424922 CSN2P05814 226 aa12.83□□□□□ -0.36
CALD1-206ENST00000424922 CDSNQ15517 529 aa12.83□□□□□ -0.36
CALD1-206ENST00000424922 SLC22A6Q4U2R8 563 aa12.83□□□□□ -0.36
CALD1-206ENST00000424922 LIN54Q6MZP7 749 aa12.83□□□□□ -0.36
CALD1-206ENST00000424922 TMEM65Q6PI78 240 aa12.83□□□□□ -0.36
CALD1-206ENST00000424922 WFDC8Q8IUA0 241 aa12.83□□□□□ -0.36
CALD1-206ENST00000424922 OR5D18Q8NGL1 313 aa12.83□□□□□ -0.36
CALD1-206ENST00000424922 MITD1Q8WV92 249 aa12.83□□□□□ -0.36
CALD1-206ENST00000424922 SPSB1Q96BD6 273 aa12.83□□□□□ -0.36
CALD1-206ENST00000424922 KIF25Q9UIL4 384 aa12.83□□□□□ -0.36
CALD1-206ENST00000424922 ERRFI1Q9UJM3 462 aaPredicted RBP12.83□□□□□ -0.36
CALD1-206ENST00000424922 ARPC5O15511 151 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 HLA-AP01891 365 aaKnown RBP12.82□□□□□ -0.36
CALD1-206ENST00000424922 CRYAAP02489 173 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 MTCP1P56278 107 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 PRDX4Q13162 271 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 NHLRC3Q5JS37 347 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.82□□□□□ -0.36
CALD1-206ENST00000424922 KLF14Q8TD94 323 aaPredicted RBP12.82□□□□□ -0.36
CALD1-206ENST00000424922 CA5BP1Q8WTZ4 195 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 CPNE2Q96FN4 548 aaPredicted RBP12.82□□□□□ -0.36
CALD1-206ENST00000424922 MARS2Q96GW9 593 aaKnown RBP12.82□□□□□ -0.36
CALD1-206ENST00000424922 BCL2L14Q9BZR8 327 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 PRELID3BQ9Y3B1 194 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 FXYD6-FXYD2A0A087WZ82 144 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 A0A1W2PP11 408 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 C9orf170A2RU37 121 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 OR2AT4A6NND4 320 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 RP2O75695 350 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 CST4P01036 141 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 THBDP07204 575 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 RAC2P15153 192 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 MGMTP16455 207 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 MPV17P39210 176 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 OR51T1Q8NGJ9 327 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 TERB2Q8NHR7 220 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 FBXW5Q969U6 566 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 BORCS8Q96FH0 119 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 ARHGAP5-AS1Q96IT6 56 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 WFIKKN1Q96NZ8 548 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 FXYD6Q9H0Q3 95 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 SLC7A11Q9UPY5 501 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 NOP16Q9Y3C1 178 aaKnown RBP12.82□□□□□ -0.36
CALD1-206ENST00000424922 ROS1P08922 2347 aa12.82□□□□□ -0.36
CALD1-206ENST00000424922 IGKV1-27A0A075B6S5 117 aa12.81□□□□□ -0.36
CALD1-206ENST00000424922 TRAV14DV4A0A0A6YYC5 116 aa12.81□□□□□ -0.36
CALD1-206ENST00000424922 ANKRD30BLA7E2S9 258 aa12.81□□□□□ -0.36
CALD1-206ENST00000424922 SERPINE3A8MV23 424 aa12.81□□□□□ -0.36
CALD1-206ENST00000424922 TSPAN4O14817 238 aa12.81□□□□□ -0.36
CALD1-206ENST00000424922 PMP2P02689 132 aa12.81□□□□□ -0.36
CALD1-206ENST00000424922 SLC25A4P12235 298 aa12.81□□□□□ -0.36
CALD1-206ENST00000424922 HOXA1P49639 335 aaPredicted RBP12.81□□□□□ -0.36
CALD1-206ENST00000424922 RBP2P50120 134 aa12.81□□□□□ -0.36
CALD1-206ENST00000424922 SORDQ00796 357 aa12.81□□□□□ -0.36
CALD1-206ENST00000424922 PSG7Q13046 419 aa12.81□□□□□ -0.36
CALD1-206ENST00000424922 PPP1R1AQ13522 171 aa12.81□□□□□ -0.36
CALD1-206ENST00000424922 SNTB1Q13884 538 aaKnown RBP12.81□□□□□ -0.36
CALD1-206ENST00000424922 MICBQ29980 383 aa12.81□□□□□ -0.36
CALD1-206ENST00000424922 ALKBH6Q3KRA9 238 aa12.81□□□□□ -0.36
CALD1-206ENST00000424922 SVIPQ8NHG7 77 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms