RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 CHST5Q9GZS9 411 aa12.27□□□□□ -0.45
RPUSD3-204ENST00000424438 TAS2R1Q9NYW7 299 aa12.27□□□□□ -0.45
RPUSD3-204ENST00000424438 NKX1-2Q9UD57 310 aaPredicted RBP12.27□□□□□ -0.45
RPUSD3-204ENST00000424438 IKZF2Q9UKS7 526 aa12.27□□□□□ -0.45
RPUSD3-204ENST00000424438 COPS3Q9UNS2 423 aa12.27□□□□□ -0.45
RPUSD3-204ENST00000424438 SIRT4Q9Y6E7 314 aaPredicted RBP12.27□□□□□ -0.45
RPUSD3-204ENST00000424438 HOXB6P17509 224 aaKnown RBP12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 MNAT1P51948 309 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 KIR2DS1Q14954 304 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 UBE2V2Q15819 145 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 C9orf152Q5JTZ5 239 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 PRAMEF5Q5TYX0 476 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 ZNF322Q6U7Q0 402 aaPredicted RBP12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 C18orf65Q6ZTR6 163 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 SLC25A26Q70HW3 274 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 FAM58AQ8N1B3 248 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 BATF2Q8N1L9 274 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 OR8U1Q8NH10 309 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 SLAMF9Q96A28 289 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 RAX2Q96IS3 184 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 CNN2Q99439 309 aaKnown RBP12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 ZNF286AQ9HBT8 521 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 TAGLN3Q9UI15 199 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 AMMECR1Q9Y4X0 333 aaPredicted RBP12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 SACSQ9NZJ4 4579 aa12.26□□□□□ -0.45
RPUSD3-204ENST00000424438 FAM230AA0A1W2PPH8 454 aa12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 SH2D7A6NKC9 451 aaPredicted RBP12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 TOR1AO14656 332 aa12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 ENTPD6O75354 484 aa12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 RAP2AP10114 183 aa12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 CDX1P47902 265 aaPredicted RBP12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 INSL3P51460 131 aa12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 KPNB1Q14974 876 aaKnown RBP12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 TEX38Q6PEX7 206 aa12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 FOXRED2Q8IWF2 684 aa12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 DEFB107AQ8IZN7 70 aa12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 TRMT10AQ8TBZ6 339 aaKnown RBP12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 PP6455Q8WZ26 134 aa12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 BORCS8Q96FH0 119 aa12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 ASCL2Q99929 193 aa12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 GON7Q9BXV9 100 aa12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 CHST6Q9GZX3 395 aa12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 RHOFQ9HBH0 211 aa12.25□□□□□ -0.45
RPUSD3-204ENST00000424438 ZNF729A6NN14 1252 aaPredicted RBP12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 SERPINE3A8MV23 424 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 CYB5AP00167 134 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 PTGFRP43088 359 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 BAIAP2L2Q6UXY1 529 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 OR8H3Q8N146 312 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 STPG2Q8N412 459 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 OR4D6Q8NGJ1 314 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 OR9G1Q8NH87 305 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 DNAJC9Q8WXX5 260 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 RPEQ96AT9 228 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 LYSTQ99698 3801 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 ELAC2Q9BQ52 826 aaKnown RBP12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 COMMD4Q9H0A8 199 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 NCOR1P1Q9H4R4 102 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 LINC00574Q9H8X3 128 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 ZNF556Q9HAH1 456 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 PLEKHA1Q9HB21 404 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 SCOCQ9UIL1 159 aa12.24□□□□□ -0.45
RPUSD3-204ENST00000424438 A0A1W2PPI3 338 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 ODAMA1E959 279 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 CCRL2O00421 344 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 SERPINA3P01011 423 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 ELANEP08246 267 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 ANXA8P13928 327 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 RBP2P50120 134 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 RAB7AP51149 207 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 LUMP51884 338 aaPredicted RBP12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 CXCR4P61073 352 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 FOXE3Q13461 319 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 FHL3Q13643 280 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 EBI3Q14213 229 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 TRIM25Q14258 630 aaKnown RBP12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 SLC35E3Q7Z769 313 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 DHFR2Q86XF0 187 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 DRAM1Q8N682 238 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 CHST4Q8NCG5 386 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 TOMM40LQ969M1 308 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 NOL4LQ96MY1 436 aaPredicted RBP12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 PRR25Q96S07 402 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 APOL4Q9BPW4 351 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 HMG20AQ9NP66 347 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 RBFOX1Q9NWB1 397 aaKnown RBP12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 CLN6Q9NWW5 311 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 IL36RNQ9UBH0 155 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 MRM2Q9UI43 246 aaKnown RBP12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 ZNF580Q9UK33 172 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 GTF2A1LQ9UNN4 478 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 ZNF256Q9Y2P7 627 aaPredicted RBP12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 SMAD5-AS1Q9Y6J3 95 aa12.23□□□□□ -0.45
RPUSD3-204ENST00000424438 AP4M1O00189 453 aa12.22□□□□□ -0.45
RPUSD3-204ENST00000424438 SH2D1BO14796 132 aa12.22□□□□□ -0.45
RPUSD3-204ENST00000424438 SYT7O43581 403 aa12.22□□□□□ -0.45
RPUSD3-204ENST00000424438 SNX3O60493 162 aa12.22□□□□□ -0.45
RPUSD3-204ENST00000424438 CST1P01037 141 aa12.22□□□□□ -0.45
RPUSD3-204ENST00000424438 SNRNP70P08621 437 aaKnown RBP12.22□□□□□ -0.45
RPUSD3-204ENST00000424438 MRPL3P09001 348 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms