RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 SF3B6Q9Y3B4 125 aaKnown RBP12.37□□□□□ -0.43
USB1-202ENST00000423271 DSCAML1Q8TD84 2053 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 IGKV1-9A0A0C4DH69 117 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 H3BUX3 64 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 GATBO75879 557 aaKnown RBP12.36□□□□□ -0.43
USB1-202ENST00000423271 SERPINA3P01011 423 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 RPSAP08865 295 aaKnown RBP12.36□□□□□ -0.43
USB1-202ENST00000423271 COX7A1P24310 79 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 MAP2K4P45985 399 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 SOX2P48431 317 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 BMXP51813 675 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 PROK1P58294 105 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 ZNF782Q6ZMW2 699 aaPredicted RBP12.36□□□□□ -0.43
USB1-202ENST00000423271 UTS2BQ765I0 119 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 PRSS48Q7RTY5 328 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 ASCC1Q8N9N2 400 aaKnown RBP12.36□□□□□ -0.43
USB1-202ENST00000423271 GPR148Q8TDV2 347 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 GHSRQ92847 366 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 PGLYRP3Q96LB9 341 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 CEP19Q96LK0 163 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 IL36RNQ9UBH0 155 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 ZNF281Q9Y2X9 895 aa12.36□□□□□ -0.43
USB1-202ENST00000423271 K7N7A8 449 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 KCNAB3O43448 404 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 ZNF737O75373 536 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 CLPXO76031 633 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 ATF1P18846 271 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 CELP19835 753 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 FUT6P51993 359 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 DLX6P56179 175 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 GABARAPL2P60520 117 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 CNN3Q15417 329 aaKnown RBP12.35□□□□□ -0.43
USB1-202ENST00000423271 SPHARQ15513 63 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 MED22Q15528 200 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 LY6EQ16553 131 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 MIDNQ504T8 468 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 SLC25A26Q70HW3 274 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 OR13C9Q8NGT0 318 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 OR5R1Q8NH85 324 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 BORCS8Q96FH0 119 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 PPA2Q9H2U2 334 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 C16orf95Q9H693 158 aa12.35□□□□□ -0.43
USB1-202ENST00000423271 NOTCH1P46531 2555 aa12.34□□□□□ -0.43
USB1-202ENST00000423271 TRBV5-5A0A0J9YX44 114 aa12.34□□□□□ -0.43
USB1-202ENST00000423271 A0A1W2PPH5 198 aa12.34□□□□□ -0.43
USB1-202ENST00000423271 TMEM82A0PJX8 343 aa12.34□□□□□ -0.43
USB1-202ENST00000423271 AZGP1P25311 298 aaKnown RBP12.34□□□□□ -0.43
USB1-202ENST00000423271 RPS11P62280 158 aaKnown RBP eCLIP12.34□□□□□ -0.43
USB1-202ENST00000423271 BDH1Q02338 343 aa12.34□□□□□ -0.43
USB1-202ENST00000423271 PARP16Q8N5Y8 322 aa12.34□□□□□ -0.43
USB1-202ENST00000423271 SSX3Q99909 188 aa12.34□□□□□ -0.43
USB1-202ENST00000423271 FAM234AQ9H0X4 552 aa12.34□□□□□ -0.43
USB1-202ENST00000423271 ZCCHC4Q9H5U6 513 aa12.34□□□□□ -0.43
USB1-202ENST00000423271 HEXA-AS1Q9H8Q6 139 aa12.34□□□□□ -0.43
USB1-202ENST00000423271 TSPAN9O75954 239 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 CD1AP06126 327 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 CHRM2P08172 466 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 OCM2P0CE71 109 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 PRKACBP22694 351 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 TGFBR2P37173 567 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 NPBWR2P48146 333 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 POU3F4P49335 361 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 EDDM3BP56851 147 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 LRRC75BQ2VPJ9 315 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 YIF1BQ5BJH7 314 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 ASPHD2Q6ICH7 369 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 TCF23Q7RTU1 214 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 RNF144BQ7Z419 303 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 LHFPL4Q7Z7J7 247 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 SERPINA12Q8IW75 414 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 DNAAF1Q8NEP3 725 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 PPP1R35Q8TAP8 253 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 EMG1Q92979 244 aaKnown RBP12.33□□□□□ -0.44
USB1-202ENST00000423271 TMEM106AQ96A25 262 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 YTHDF1Q9BYJ9 559 aaKnown RBP12.33□□□□□ -0.44
USB1-202ENST00000423271 RBFOX1Q9NWB1 397 aaKnown RBP12.33□□□□□ -0.44
USB1-202ENST00000423271 TAS2R4Q9NYW5 299 aa12.33□□□□□ -0.44
USB1-202ENST00000423271 C17orf98A8MV24 154 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 SULT1B1O43704 296 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 HAND1O96004 215 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 CD2P06729 351 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 CALCBP10092 127 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 BCL3P20749 454 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 DUSP1P28562 367 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 RBP2P50120 134 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 ATP1B3P54709 279 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 SNU13P55769 128 aaKnown RBP12.32□□□□□ -0.44
USB1-202ENST00000423271 EDDM3AQ14507 147 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 TBCEQ15813 527 aaPredicted RBP12.32□□□□□ -0.44
USB1-202ENST00000423271 Q499Y3 187 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 SLC35E4Q6ICL7 350 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 OR8H2Q8N162 312 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 DYNAPQ8N1N2 210 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 TPRX1Q8N7U7 411 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 OR5D14Q8NGL3 314 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 RFT1Q96AA3 541 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 SPSB1Q96BD6 273 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 ORAI1Q96D31 301 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 OPALINQ96PE5 141 aa12.32□□□□□ -0.44
USB1-202ENST00000423271 SPACA5Q96QH8 159 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms