RNA–Protein interactions for RNA: ENST00000417243.5

TRAPPC12-206, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 1,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-206ENST00000417243 CHRM2P08172 466 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 PRDX2P32119 198 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 NR4A2P43354 598 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 ART1P52961 327 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 GMFBP60983 142 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 PAX5Q02548 391 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 CARTPTQ16568 116 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 TAF9Q16594 264 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 CLEC12BQ2HXU8 276 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 AVPI1Q5T686 147 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 SIGIRRQ6IA17 410 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 RAB12Q6IQ22 244 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 LINC00299Q6ZSB3 139 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 SLC36A1Q7Z2H8 476 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 BIVMQ86UB2 503 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 ZNF561Q8N587 486 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 CD177Q8N6Q3 437 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 C19orf18Q8NEA5 215 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 GAFA1Q96PS6 74 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 NICN1Q9BSH3 213 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 ZNF665Q9H7R5 613 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 COMMD3Q9UBI1 195 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 ADAM30Q9UKF2 790 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 HSF4Q9ULV5 492 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 CSMD1Q96PZ7 3565 aa10.47□□□□□ -0.73
TRAPPC12-206ENST00000417243 DSCAML1Q8TD84 2053 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 CREBBPQ92793 2442 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 IGHV4-30-2A0A087WSY4 118 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 A0A096LNT2 108 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 ISPDA4D126 451 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 SLC33A1O00400 549 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 PDCD6O75340 191 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 CLPXO76031 633 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 OR7C1O76099 320 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 TPPPO94811 219 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 GYPAP02724 150 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 CSN2P05814 226 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 CHATP28329 748 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 KCNJ3P48549 501 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 IL13RA1P78552 427 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 IKZF1Q13422 519 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 DEFB108BQ8NET1 73 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 MED30Q96HR3 178 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 C6orf62Q9GZU0 229 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 FAM234AQ9H0X4 552 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 MIXL1Q9H2W2 232 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 PATZ1Q9HBE1 687 aaKnown RBP10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.46□□□□□ -0.736e-6■■■■□ 22.2
TRAPPC12-206ENST00000417243 MIOXQ9UGB7 285 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 OR14J1Q9UGF5 321 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 MAB21L2Q9Y586 359 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 PEX16Q9Y5Y5 336 aa10.46□□□□□ -0.73
TRAPPC12-206ENST00000417243 DOCK11Q5JSL3 2073 aa10.46□□□□□ -0.74
TRAPPC12-206ENST00000417243 TRAV24A0A0B4J272 114 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 CTDSP2O14595 271 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 HPGDSO60760 199 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 IGHV2-5P01817 119 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 EIF4EP06730 217 aaKnown RBP10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 ZNF44P15621 663 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 ELK1P19419 428 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 FUT3P21217 361 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 GABRR1P24046 479 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 DUSP1P28562 367 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 MNDAP41218 407 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 PITPNBP48739 271 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 CEBPDP49716 269 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 VEGFCP49767 419 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 SNU13P55769 128 aaKnown RBP10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 COL10A1Q03692 680 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 ARL6IP1Q15041 203 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 C11orf91Q3C1V1 193 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 LAX1Q8IWV1 398 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 CMTM4Q8IZR5 234 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 OR5T2Q8NGG2 359 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 OR10R2Q8NGX6 335 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 PPP1R35Q8TAP8 253 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 SNX22Q96L94 193 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 ATG5Q9H1Y0 275 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 CTSZQ9UBR2 303 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 NOTCH2Q04721 2471 aa10.45□□□□□ -0.74
TRAPPC12-206ENST00000417243 ABCA2Q9BZC7 2435 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 TMEM82A0PJX8 343 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 A8MXK9 166 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 K7N7A8 449 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 SIRPB1O00241 398 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 MFNGO00587 321 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 DEGS1O15121 323 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 TMPRSS2O15393 492 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 SOCS1O15524 211 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 RGS5O15539 181 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 ADAM20O43506 726 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 XRCC3O43542 346 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 PSPNO60542 156 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 WNT2P09544 360 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 RPS2P15880 293 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 HIST1H1DP16402 221 aaKnown RBP10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 CDK2P24941 298 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 BLVRBP30043 206 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 GABRA2P47869 451 aa10.44□□□□□ -0.74
TRAPPC12-206ENST00000417243 OR3A1P47881 315 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms