RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 LINC00312Q9Y6C7 94 aa16.33■□□□□ 0.2
CTTN-205ENST00000415461 TSPAN9O75954 239 aa16.32■□□□□ 0.2
CTTN-205ENST00000415461 CLPXO76031 633 aa16.32■□□□□ 0.2
CTTN-205ENST00000415461 ETV1P50549 477 aa16.32■□□□□ 0.2
CTTN-205ENST00000415461 ZP1P60852 638 aa16.32■□□□□ 0.2
CTTN-205ENST00000415461 IL18R1Q13478 541 aa16.32■□□□□ 0.2
CTTN-205ENST00000415461 RCN1Q15293 331 aa16.32■□□□□ 0.2
CTTN-205ENST00000415461 KISS1Q15726 138 aa16.32■□□□□ 0.2
CTTN-205ENST00000415461 LDLRAD2Q5SZI1 272 aa16.32■□□□□ 0.2
CTTN-205ENST00000415461 OR2G6Q5TZ20 316 aa16.32■□□□□ 0.2
CTTN-205ENST00000415461 SERPINA12Q8IW75 414 aa16.32■□□□□ 0.2
CTTN-205ENST00000415461 PPP1R35Q8TAP8 253 aa16.32■□□□□ 0.2
CTTN-205ENST00000415461 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.32■□□□□ 0.2
CTTN-205ENST00000415461 FAM90A8PA6NJQ4 464 aa16.31■□□□□ 0.2
CTTN-205ENST00000415461 MGST3O14880 152 aa16.31■□□□□ 0.2
CTTN-205ENST00000415461 DCKP27707 260 aa16.31■□□□□ 0.2
CTTN-205ENST00000415461 SOX2P48431 317 aa16.31■□□□□ 0.2
CTTN-205ENST00000415461 P2RX3P56373 397 aa16.31■□□□□ 0.2
CTTN-205ENST00000415461 CDK5R1Q15078 307 aa16.31■□□□□ 0.2
CTTN-205ENST00000415461 AANATQ16613 207 aa16.31■□□□□ 0.2
CTTN-205ENST00000415461 ZNF626Q68DY1 528 aa16.31■□□□□ 0.2
CTTN-205ENST00000415461 ASPHD2Q6ICH7 369 aa16.31■□□□□ 0.2
CTTN-205ENST00000415461 SAXO1Q8IYX7 474 aa16.31■□□□□ 0.2
CTTN-205ENST00000415461 OR51A2Q8NGJ7 313 aa16.31■□□□□ 0.2
CTTN-205ENST00000415461 OR5D14Q8NGL3 314 aa16.31■□□□□ 0.2
CTTN-205ENST00000415461 SESN1Q9Y6P5 492 aa16.31■□□□□ 0.2
CTTN-205ENST00000415461 SH2D1BO14796 132 aa16.3■□□□□ 0.2
CTTN-205ENST00000415461 CHST1O43916 411 aa16.3■□□□□ 0.2
CTTN-205ENST00000415461 ALX3O95076 343 aa16.3■□□□□ 0.2
CTTN-205ENST00000415461 RPSAP08865 295 aaKnown RBP16.3■□□□□ 0.2
CTTN-205ENST00000415461 TMEM225BP0DP42 221 aa16.3■□□□□ 0.2
CTTN-205ENST00000415461 DYNC1I2Q13409 638 aaKnown RBP16.3■□□□□ 0.2
CTTN-205ENST00000415461 SLC35E4Q6ICL7 350 aa16.3■□□□□ 0.2
CTTN-205ENST00000415461 TRAPPC6BQ86SZ2 158 aa16.3■□□□□ 0.2
CTTN-205ENST00000415461 OR11H6Q8NGC7 330 aa16.3■□□□□ 0.2
CTTN-205ENST00000415461 PIFOQ8TCI5 191 aa16.3■□□□□ 0.2
CTTN-205ENST00000415461 HAVCR2Q8TDQ0 301 aa16.3■□□□□ 0.2
CTTN-205ENST00000415461 TAS2R4Q9NYW5 299 aa16.3■□□□□ 0.2
CTTN-205ENST00000415461 TBL2Q9Y4P3 447 aaKnown RBP16.3■□□□□ 0.2
CTTN-205ENST00000415461 VWFP04275 2813 aa16.29■□□□□ 0.2
CTTN-205ENST00000415461 MMP23AO75900 390 aa16.29■□□□□ 0.2
CTTN-205ENST00000415461 ZNF44P15621 663 aa16.29■□□□□ 0.2
CTTN-205ENST00000415461 RAB3AP20336 220 aa16.29■□□□□ 0.2
CTTN-205ENST00000415461 ERP29P30040 261 aaKnown RBP16.29■□□□□ 0.2
CTTN-205ENST00000415461 GABRA5P31644 462 aa16.29■□□□□ 0.2
CTTN-205ENST00000415461 SCN1BQ07699 218 aa16.29■□□□□ 0.2
CTTN-205ENST00000415461 CCDC58Q4VC31 144 aa16.29■□□□□ 0.2
CTTN-205ENST00000415461 TTC23Q5W5X9 447 aa16.29■□□□□ 0.2
CTTN-205ENST00000415461 ZNF529Q6P280 563 aa16.29■□□□□ 0.2
CTTN-205ENST00000415461 Q6P435 159 aa16.29■□□□□ 0.2
CTTN-205ENST00000415461 RPL22L1Q6P5R6 122 aaKnown RBP16.29■□□□□ 0.2
CTTN-205ENST00000415461 PACRGLQ8N7B6 248 aa16.29■□□□□ 0.2
CTTN-205ENST00000415461 FOXRED1Q96CU9 486 aaPredicted RBP16.29■□□□□ 0.2
CTTN-205ENST00000415461 NKX3-1Q99801 234 aaPredicted RBP16.29■□□□□ 0.2
CTTN-205ENST00000415461 DIMT1Q9UNQ2 313 aaKnown RBP16.29■□□□□ 0.2
CTTN-205ENST00000415461 SIGLEC9Q9Y336 463 aa16.29■□□□□ 0.2
CTTN-205ENST00000415461 PCDHGB5Q9Y5G0 923 aa16.29■□□□□ 0.2
CTTN-205ENST00000415461 SIRT4Q9Y6E7 314 aaPredicted RBP16.29■□□□□ 0.2
CTTN-205ENST00000415461 IGHV2-26A0A0B4J1V2 119 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 MEGF11A6BM72 1044 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 VGLL3A8MV65 326 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 MYL12AP19105 171 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 LMO1P25800 156 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 AESQ08117 197 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 FAM189A2Q15884 450 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 SSX2Q16385 188 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 PRAMEF5Q5TYX0 476 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 TMPRSS11AQ6ZMR5 421 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 SETD9Q8NE22 299 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 RPS4Y2Q8TD47 263 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 GPR148Q8TDV2 347 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 RHOFQ9HBH0 211 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 TCF7L1Q9HCS4 588 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 C8orf4Q9NR00 106 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 ING3Q9NXR8 418 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 CLEC2DQ9UHP7 191 aa16.28■□□□□ 0.2
CTTN-205ENST00000415461 UBE2J1Q9Y385 318 aaPredicted RBP16.28■□□□□ 0.2
CTTN-205ENST00000415461 A0A0G2JK05 382 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 IRGMA1A4Y4 181 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 SLC33A1O00400 549 aaPredicted RBP16.27■□□□□ 0.2
CTTN-205ENST00000415461 GABRPO00591 440 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 LALBAP00709 142 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 JUNBP17275 347 aaPredicted RBP16.27■□□□□ 0.2
CTTN-205ENST00000415461 GLIPR1P48060 266 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 RAB13P51153 203 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 ADARB1P78563 741 aaKnown RBP16.27■□□□□ 0.2
CTTN-205ENST00000415461 ATXN7L3Q14CW9 347 aaPredicted RBP16.27■□□□□ 0.2
CTTN-205ENST00000415461 BAIAP2L2Q6UXY1 529 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 SATL1Q86VE3 508 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 DHRSXQ8N5I4 330 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 OR4C13Q8NGP0 309 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 TNFAIP8L1Q8WVP5 186 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 TMEM106AQ96A25 262 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 COQ2Q96H96 371 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 GPER1Q99527 375 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 FAM192AQ9GZU8 254 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 TMEM133Q9H2Q1 129 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 RAB18Q9NP72 206 aa16.27■□□□□ 0.2
CTTN-205ENST00000415461 EXOSC1Q9Y3B2 195 aaKnown RBP16.27■□□□□ 0.2
CTTN-205ENST00000415461 TRGV10A0A0A0MS01 117 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms