RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ZNF2Q9BSG1 426 aaPredicted RBP11.67□□□□□ -0.54
LIMS1-205ENST00000410093 IFT22Q9H7X7 185 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 RCC2Q9P258 522 aaKnown RBP11.67□□□□□ -0.54
LIMS1-205ENST00000410093 ZNF230Q9UIE0 474 aaPredicted RBP11.67□□□□□ -0.54
LIMS1-205ENST00000410093 GPR160Q9UJ42 338 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 RTTNQ86VV8 2226 aa11.67□□□□□ -0.54
LIMS1-205ENST00000410093 CRYM-AS1A6NIL9 109 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 SDCBPO00560 298 aaPredicted RBP11.66□□□□□ -0.54
LIMS1-205ENST00000410093 BCL2L11O43521 198 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 SERPINF1P36955 418 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 SUPT4H1P63272 117 aaKnown RBP11.66□□□□□ -0.54
LIMS1-205ENST00000410093 LY6DQ14210 128 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 C3AR1Q16581 482 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 EIF2S3LQ2VIR3 472 aaKnown RBP11.66□□□□□ -0.54
LIMS1-205ENST00000410093 DMRTC1Q5HYR2 192 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 RTN4RL2Q86UN3 420 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 MDP1Q86V88 176 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 CALHM1Q8IU99 346 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 SLC38A6Q8IZM9 456 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 C17orf78Q8N4C9 275 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 ZADH2Q8N4Q0 377 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 CCDC71LQ8N9Z2 235 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 EXTL1Q92935 676 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 GALNT14Q96FL9 552 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 ZNF75AQ96N20 296 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 SUCNR1Q9BXA5 334 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 SLC25A32Q9H2D1 315 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 C12orf49Q9H741 205 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 ZNF442Q9H7R0 627 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 DNAJB11Q9UBS4 358 aa11.66□□□□□ -0.54
LIMS1-205ENST00000410093 KIR2DS1A0A191URI9 304 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 FAM25EA8MYX2 175 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 ZNF732B4DXR9 585 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 H7C1Q1 480 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 CFDP00746 253 aaPredicted RBP11.65□□□□□ -0.54
LIMS1-205ENST00000410093 PLATP00750 562 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 IFNA21P01568 189 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 ZNF728P0DKX0 622 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 RPS2P15880 293 aaKnown RBP11.65□□□□□ -0.54
LIMS1-205ENST00000410093 HOXC12P31275 282 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 KIR2DS4P43632 304 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 HAAOP46952 286 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 FOXG1P55316 489 aaPredicted RBP11.65□□□□□ -0.54
LIMS1-205ENST00000410093 RBM39Q14498 530 aaKnown RBP11.65□□□□□ -0.54
LIMS1-205ENST00000410093 KIR2DS1Q14954 304 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 GABRA6Q16445 453 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 PIGYQ3MUY2 71 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 HPSE2Q8WWQ2 592 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 MICU1Q9BPX6 476 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 METTL8Q9H825 291 aaKnown RBP11.65□□□□□ -0.54
LIMS1-205ENST00000410093 CDH20Q9HBT6 801 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 MED12LQ86YW9 2145 aa11.65□□□□□ -0.54
LIMS1-205ENST00000410093 TRBV6-6A0A0A6YYG2 114 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 ZNF503-AS2A6NEH8 195 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 OR7C1O76099 320 aaPredicted RBP11.65□□□□□ -0.55
LIMS1-205ENST00000410093 ACAA1P09110 424 aaPredicted RBP11.65□□□□□ -0.55
LIMS1-205ENST00000410093 RAC2P15153 192 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 ZNF14P17017 642 aaPredicted RBP11.65□□□□□ -0.55
LIMS1-205ENST00000410093 COX5AP20674 150 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 GLRA1P23415 457 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 GPM6AP51674 278 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 EIF5AP63241 154 aaKnown RBP11.65□□□□□ -0.55
LIMS1-205ENST00000410093 SRPXP78539 464 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 NAAAQ02083 359 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 ABCA11PQ4W5N1 156 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 HIKESHIQ53FT3 197 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 THOC7Q6I9Y2 204 aaKnown RBP11.65□□□□□ -0.55
LIMS1-205ENST00000410093 PRSS54Q6PEW0 395 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 LRTM2Q8N967 370 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 OR5M9Q8NGP3 310 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 MOB3AQ96BX8 217 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 SEC22AQ96IW7 307 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 CITED4Q96RK1 184 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 SLX1AQ9BQ83 275 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 RTL8AQ9BWD3 113 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 POLDIP2Q9Y2S7 368 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 SESN1Q9Y6P5 492 aa11.65□□□□□ -0.55
LIMS1-205ENST00000410093 IGSF10Q6WRI0 2623 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 MGAQ8IWI9 3026 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 C13orf42A0A1B0GVH6 325 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 J3QT63 122 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 DIRAS3O95661 229 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 CBR1P16152 277 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 PTGER4P35408 488 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 WNT5AP41221 380 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 HERV-K104P61576 105 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 TBR1Q16650 682 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 COMMD7Q86VX2 200 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 PDZD9Q8IXQ8 264 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 ZNF843Q8N446 348 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 FAM169BQ8N8A8 192 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 ST8SIA2Q92186 375 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 TRIB1Q96RU8 372 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 ARPC5LQ9BPX5 153 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 TREM2Q9NZC2 230 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 PFDN2Q9UHV9 154 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 KCNMB2Q9Y691 235 aa11.64□□□□□ -0.55
LIMS1-205ENST00000410093 SMG1Q96Q15 3661 aaKnown RBP11.63□□□□□ -0.55
LIMS1-205ENST00000410093 IGKV1D-8A0A087WSZ0 117 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 TEX13DA0A0J9YY54 714 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms