RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 C5orf66Q9H5L9 145 aa12.39□□□□□ -0.43
MINDY4-202ENST00000409881 PARP11Q9NR21 331 aa12.39□□□□□ -0.43
MINDY4-202ENST00000409881 SHANK1Q9Y566 2161 aa12.39□□□□□ -0.43
MINDY4-202ENST00000409881 PRSS37A4D1T9 235 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 HSPB2A8KAH6 182 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 ZNF724A8MTY0 619 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 LYL1P12980 280 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 NTF4P34130 210 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 PMELP40967 661 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 SSTP61278 116 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 HSPB2Q16082 182 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 ANKRD55Q3KP44 614 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 TMEM128Q5BJH2 165 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 PYY3Q5JQD4 70 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 OR2A2Q6IF42 318 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 SEM1Q6ZVN7 128 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 OR4K15Q8NH41 348 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 AKR7LQ8NHP1 331 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 GMPPAQ96IJ6 420 aaPredicted RBP12.38□□□□□ -0.43
MINDY4-202ENST00000409881 CNTD2Q9H8S5 307 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 TREM2Q9NZC2 230 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 TRGV8A0A0C4DH27 118 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 GPR37O15354 613 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 MRPL33O75394 65 aaKnown RBP12.38□□□□□ -0.43
MINDY4-202ENST00000409881 PRB1P04280 392 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 FSTP19883 344 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 TAS2R31P59538 309 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 UNC119Q13432 240 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 SLC18B1Q6NT16 456 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 CATSPERDQ86XM0 798 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 ZNF383Q8NA42 475 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 NOXO1Q8NFA2 376 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 KCNK17Q96T54 332 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 SMIM3Q9BZL3 60 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 C12orf49Q9H741 205 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 TUBA4BQ9H853 241 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 MRPL22Q9NWU5 206 aaKnown RBP12.38□□□□□ -0.43
MINDY4-202ENST00000409881 EMC9Q9Y3B6 208 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 LRP12Q9Y561 859 aa12.38□□□□□ -0.43
MINDY4-202ENST00000409881 A0A1B0GV90 55 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 MBD3L4A6NDZ8 208 aaPredicted RBP12.37□□□□□ -0.43
MINDY4-202ENST00000409881 MBD3L3A6NE82 208 aaPredicted RBP12.37□□□□□ -0.43
MINDY4-202ENST00000409881 MBD3L5A6NJ08 208 aaPredicted RBP12.37□□□□□ -0.43
MINDY4-202ENST00000409881 SFT2D2O95562 160 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 PGA4P0DJD7 388 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 PGA3P0DJD8 388 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 SULT1A1P50225 295 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 RAB5CP51148 216 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 RIDAP52758 137 aaKnown RBP12.37□□□□□ -0.43
MINDY4-202ENST00000409881 CASP6P55212 293 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 FMODQ06828 376 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 CLINT1Q14677 625 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 NUFIP2Q7Z417 695 aaKnown RBP12.37□□□□□ -0.43
MINDY4-202ENST00000409881 TMEM123Q8N131 208 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 CNEP1R1Q8N9A8 125 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 MBD3L2Q8NHZ7 208 aaPredicted RBP12.37□□□□□ -0.43
MINDY4-202ENST00000409881 TMEM45BQ96B21 275 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 RAB3CQ96E17 227 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 RAB18Q9NP72 206 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 GLRX2Q9NS18 164 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 RAB22AQ9UL26 194 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 LOC107986453A0A1B0GWG9 222 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 SS18L1O75177 396 aaPredicted RBP12.37□□□□□ -0.43
MINDY4-202ENST00000409881 IFNA2P01563 188 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 HOXB5P09067 269 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 CSNK1A1P48729 337 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 EIF5AP63241 154 aaKnown RBP12.37□□□□□ -0.43
MINDY4-202ENST00000409881 MRPL49Q13405 166 aaKnown RBP12.37□□□□□ -0.43
MINDY4-202ENST00000409881 HMGN3Q15651 99 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 C1orf100Q5SVJ3 147 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 TERB2Q8NHR7 220 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 MRPL13Q9BYD1 178 aaKnown RBP12.37□□□□□ -0.43
MINDY4-202ENST00000409881 GP6Q9HCN6 339 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 VSX1Q9NZR4 365 aaPredicted RBP12.37□□□□□ -0.43
MINDY4-202ENST00000409881 OSGIN2Q9Y236 505 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 RHBDD3Q9Y3P4 386 aa12.37□□□□□ -0.43
MINDY4-202ENST00000409881 MEGF11A6BM72 1044 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 IFITM10A6NMD0 228 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 SLC16A7O60669 478 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 TSPAN15O95858 294 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 IGHV3-9P01782 118 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 SFTPBP07988 381 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 HKR1P10072 659 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 CD37P11049 281 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 FOXF2Q12947 444 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 Q3ZCU0 254 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 MIDNQ504T8 468 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 TMEM268Q5VZI3 342 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 ZNF100Q8IYN0 542 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 ZNF565Q8N9K5 539 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 SLAMF9Q96A28 289 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 ABHD6Q9BV23 337 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 EIF5A2Q9GZV4 153 aaKnown RBP12.36□□□□□ -0.43
MINDY4-202ENST00000409881 PARPBPQ9NWS1 579 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 HHLA2Q9UM44 414 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 POMT1Q9Y6A1 747 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 MED12LQ86YW9 2145 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 KALRNO60229 2985 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 ST8SIA5O15466 376 aa12.36□□□□□ -0.43
MINDY4-202ENST00000409881 MPZL1O95297 269 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms