RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 TRBV2A0A0J9YWF9 115 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 TMEM238LA0A1B0GVL6 79 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 TMEM212A6NML5 194 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 H3BUX3 64 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 PSPNO60542 156 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 CYB5AP00167 134 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 LALBAP00709 142 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 CRYBA1P05813 215 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 HCKP08631 526 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 CCDC159P0C7I6 412 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 GABRR1P24046 479 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR3A1P47881 315 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 RAG2P55895 527 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 KRTAP10-3P60369 221 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 ADARB1P78563 741 aaKnown RBP4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 SCN1BQ07699 218 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 PDZK1IP1Q13113 114 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 GRK1Q15835 563 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 LY6EQ16553 131 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 PLA1AQ53H76 456 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 TTC23Q5W5X9 447 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 NCR3LG1Q68D85 454 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 ASPHD2Q6ICH7 369 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 LAIR2Q6ISS4 152 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 C17orf107Q6ZR85 190 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 C1orf122Q6ZSJ8 110 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 GDPD3Q7L5L3 318 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 LHFPL4Q7Z7J7 247 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR8H2Q8N162 312 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 DYNAPQ8N1N2 210 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 DHRSXQ8N5I4 330 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 PACRGLQ8N7B6 248 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZFP41Q8N8Y5 198 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR4S1Q8NGB4 309 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR5D13Q8NGL4 314 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR10K1Q8NGX5 313 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 GGHQ92820 318 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 SPSB1Q96BD6 273 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 WDR89Q96FK6 387 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 SNX22Q96L94 193 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 JAM3Q9BX67 310 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 COMMD4Q9H0A8 199 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 FAM234AQ9H0X4 552 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZCCHC4Q9H5U6 513 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 HMG20AQ9NP66 347 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 INPP5EQ9NRR6 644 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 ING3Q9NXR8 418 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 TAS2R4Q9NYW5 299 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 NKX1-2Q9UD57 310 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 DHDHQ9UQ10 334 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 GSTK1Q9Y2Q3 226 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 CAB39Q9Y376 341 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 SF3B6Q9Y3B4 125 aaKnown RBP4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 POMT1Q9Y6A1 747 aa4.69□□□□□ -1.66
HMGB1P20-201ENST00000402555 PNMA8CA0A1B0GUJ8 204 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 A0A1W2PPH5 198 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 CLPSL1A2RUU4 121 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 BTBD17A6NE02 478 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 C17orf98A8MV24 154 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 GABRPO00591 440 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 HSPB6O14558 160 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 SULT1B1O43704 296 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 XPNPEP2O43895 674 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 MMP23AO75900 390 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 KDM4BO94953 1096 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 NDUFA7O95182 113 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR2H2O95918 312 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 MT-ND2P03891 347 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 RPSAP08865 295 aaKnown RBP4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF728P0DKX0 622 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 TMEM225BP0DP42 221 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF44P15621 663 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 MYL12AP19105 171 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 DCKP27707 260 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZP1P60852 638 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 ACSM1Q08AH1 577 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 ST3GAL4Q11206 333 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF146Q15072 292 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 CDK5R1Q15078 307 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 KISS1Q15726 138 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 LDLRAD2Q5SZI1 272 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 OGFRL1Q5TC84 451 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 DHRS7BQ6IAN0 325 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 RPL22L1Q6P5R6 122 aaKnown RBP4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 BAIAP2L2Q6UXY1 529 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 TMPRSS11AQ6ZMR5 421 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 Q6ZSV7 163 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 TRAPPC6BQ86SZ2 158 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 SATL1Q86VE3 508 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 SERPINA12Q8IW75 414 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 Q8IYB0 196 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 PARP16Q8N5Y8 322 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 BEND2Q8NDZ0 799 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 SETD9Q8NE22 299 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR5D14Q8NGL3 314 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR4F5Q8NH21 305 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 DYRK2Q92630 601 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 TMEM80Q96HE8 168 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 FANCD2OSQ96PS1 177 aa4.68□□□□□ -1.66
HMGB1P20-201ENST00000402555 NR1H4Q96RI1 486 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms