RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 FAAP24Q9BTP7 215 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 TMEM59Q9BXS4 323 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 CHST6Q9GZX3 395 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 SHARPINQ9H0F6 387 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 RGCCQ9H4X1 137 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 BEX1Q9HBH7 125 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 ABRACLQ9P1F3 81 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 CCDC168Q8NDH2 2452 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 ITPR2Q14571 2701 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 A0A1B0GUH1 482 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 LDLRAD4O15165 306 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 RAC2P15153 192 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 EGR1P18146 543 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 PMELP40967 661 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 ARHGDIBP52566 201 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 KLF3P57682 345 aaPredicted RBP9.91□□□□□ -0.82
SKA3-203ENST00000400018 MOGAT3Q86VF5 341 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 CDH26Q8IXH8 852 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 GDPD1Q8N9F7 314 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 ZNF431Q8TF32 576 aaPredicted RBP9.91□□□□□ -0.82
SKA3-203ENST00000400018 RDH5Q92781 318 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 LIME1Q9H400 295 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 CISD1Q9NZ45 108 aaKnown RBP9.91□□□□□ -0.82
SKA3-203ENST00000400018 NDRG3Q9UGV2 375 aa9.91□□□□□ -0.82
SKA3-203ENST00000400018 NOTCH2Q04721 2471 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 TMEM14DPA8MWL7 114 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 OR7C1O76099 320 aaPredicted RBP9.9□□□□□ -0.82
SKA3-203ENST00000400018 CYB5R3P00387 301 aaPredicted RBP9.9□□□□□ -0.82
SKA3-203ENST00000400018 MT-ND4P03905 459 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 S100A6P06703 90 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 BLVRBP30043 206 aaPredicted RBP9.9□□□□□ -0.82
SKA3-203ENST00000400018 FUT6P51993 359 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 ATP1B3P54709 279 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 ASAH1Q13510 395 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 CNN3Q15417 329 aaKnown RBP9.9□□□□□ -0.82
SKA3-203ENST00000400018 NCMAPQ5T1S8 102 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 FAM53AQ6NSI3 398 aaPredicted RBP9.9□□□□□ -0.82
SKA3-203ENST00000400018 C17orf107Q6ZR85 190 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 Q6ZSR3 168 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 C11orf53Q8IXP5 236 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 NKAIN3Q8N8D7 197 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 S100A16Q96FQ6 103 aaKnown RBP9.9□□□□□ -0.82
SKA3-203ENST00000400018 VRK1Q99986 396 aaPredicted RBP9.9□□□□□ -0.82
SKA3-203ENST00000400018 SOSTQ9BQB4 213 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 HEXA-AS1Q9H8Q6 139 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 MGAT4AQ9UM21 535 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 ST3GAL6Q9Y274 331 aa9.9□□□□□ -0.82
SKA3-203ENST00000400018 RAB19A4D1S5 217 aa9.9□□□□□ -0.83
SKA3-203ENST00000400018 IQCF6A8MYZ5 107 aa9.9□□□□□ -0.83
SKA3-203ENST00000400018 PLA2G10O15496 165 aa9.9□□□□□ -0.83
SKA3-203ENST00000400018 CSTBP04080 98 aaKnown RBP9.9□□□□□ -0.83
SKA3-203ENST00000400018 SSTR2P30874 369 aa9.9□□□□□ -0.83
SKA3-203ENST00000400018 GLRXP35754 106 aa9.9□□□□□ -0.83
SKA3-203ENST00000400018 NUP62P37198 522 aaPredicted RBP9.9□□□□□ -0.83
SKA3-203ENST00000400018 CDNFQ49AH0 187 aa9.9□□□□□ -0.83
SKA3-203ENST00000400018 PNLDC1Q8NA58 520 aaKnown RBP9.9□□□□□ -0.83
SKA3-203ENST00000400018 WDFY2Q96P53 400 aa9.9□□□□□ -0.83
SKA3-203ENST00000400018 THAP7Q9BT49 309 aaPredicted RBP9.9□□□□□ -0.83
SKA3-203ENST00000400018 PLK3Q9H4B4 646 aa9.9□□□□□ -0.83
SKA3-203ENST00000400018 APCP25054 2843 aa9.9□□□□□ -0.83
SKA3-203ENST00000400018 MEGF11A6BM72 1044 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 PTAFRP25105 342 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 CLLU1Q5K131 121 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 Q6ZTK2 550 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 DPPA2Q7Z7J5 298 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 YIPF5Q969M3 257 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 OR51I2Q9H344 312 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 C1orf123Q9NWV4 160 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 DYSFO75923 2080 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 IGKV1D-8A0A087WSZ0 117 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 M0QYG6 137 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 SIRPB1O00241 398 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 ORC5O43913 435 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 CST4P01036 141 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 SOD3P08294 240 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 CDKN1AP38936 164 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 HOXA1P49639 335 aaPredicted RBP9.89□□□□□ -0.83
SKA3-203ENST00000400018 CCR6P51684 374 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 RRAS2P62070 204 aaPredicted RBP9.89□□□□□ -0.83
SKA3-203ENST00000400018 Q6ZPA2 131 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 ACOT12Q8WYK0 555 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 BOD1Q96IK1 185 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 LAMP3Q9UQV4 416 aa9.89□□□□□ -0.83
SKA3-203ENST00000400018 WNK2Q9Y3S1 2297 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 A0A0A6YYJ9 748 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 PLSCR5A0PG75 271 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 CFDP00746 253 aaPredicted RBP9.88□□□□□ -0.83
SKA3-203ENST00000400018 IGHV1-46P01743 117 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 CD3EP07766 207 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 ERCC1P07992 297 aaPredicted RBP9.88□□□□□ -0.83
SKA3-203ENST00000400018 ZP3P21754 424 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 ZNF81P51508 661 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 CSNK2A3Q8NEV1 391 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 MRPL24Q96A35 216 aaKnown RBP9.88□□□□□ -0.83
SKA3-203ENST00000400018 KCTD12Q96CX2 325 aaKnown RBP9.88□□□□□ -0.83
SKA3-203ENST00000400018 SULT4A1Q9BR01 284 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 ESRP2Q9H6T0 727 aaKnown RBP9.88□□□□□ -0.83
SKA3-203ENST00000400018 NLKQ9UBE8 527 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 LGALS8O00214 317 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 PTBP3O95758 552 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms