RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 DUSP1P28562 367 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 SMIM21Q3B7S5 101 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 SPIN3Q5JUX0 258 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 Q6P435 159 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 GDPD1Q8N9F7 314 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 CHST4Q8NCG5 386 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 HPS1Q92902 700 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 GCDHQ92947 438 aaPredicted RBP14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 SMR3AQ99954 134 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 PECRQ9BY49 303 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 IFT22Q9H7X7 185 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 ZMAT3Q9HA38 289 aaKnown RBP14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 RCC2Q9P258 522 aaKnown RBP14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 KCNK7Q9Y2U2 307 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 NPTNQ9Y639 398 aa14.21□□□□□ -0.13
TSPAN4-205ENST00000397406 IFNL4K9M1U5 179 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 OVOL3O00110 214 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 OR7C1O76099 320 aaPredicted RBP14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 KNG1P01042 644 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 MELTFP08582 738 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 GSTP1P09211 210 aaKnown RBP14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 IRF2P14316 349 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 CD80P33681 288 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 CDKN1AP38936 164 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 IKZF1Q13422 519 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 CDNFQ49AH0 187 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 FAM201AQ5SY85 155 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 FIP1L1Q6UN15 594 aaKnown RBP14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 DNM1P46Q6ZS02 220 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 Q6ZTK2 550 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 C6orf201Q7Z4U5 140 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 FAM90A1Q86YD7 464 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 BOLLQ8N9W6 283 aaKnown RBP14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 C15orf40Q8WUR7 153 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 NEU4Q8WWR8 484 aaPredicted RBP14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 ST8SIA4Q92187 359 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 BORCS5Q969J3 196 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 TMEM106BQ9NUM4 274 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 BEX4Q9NWD9 120 aaPredicted RBP14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 ELF5Q9UKW6 265 aaPredicted RBP14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 HSF4Q9ULV5 492 aa14.2□□□□□ -0.14
TSPAN4-205ENST00000397406 TMEM235A6NFC5 223 aa14.19□□□□□ -0.14
TSPAN4-205ENST00000397406 LRRC30A6NM36 301 aa14.19□□□□□ -0.14
TSPAN4-205ENST00000397406 TMEM178BH3BS89 294 aa14.19□□□□□ -0.14
TSPAN4-205ENST00000397406 GSTZ1O43708 216 aaPredicted RBP14.19□□□□□ -0.14
TSPAN4-205ENST00000397406 PDCD6O75340 191 aa14.19□□□□□ -0.14
TSPAN4-205ENST00000397406 DGCR2P98153 550 aa14.19□□□□□ -0.14
TSPAN4-205ENST00000397406 OLFML2AQ68BL7 652 aa14.19□□□□□ -0.14
TSPAN4-205ENST00000397406 Q8N402 240 aa14.19□□□□□ -0.14
TSPAN4-205ENST00000397406 CCL17Q92583 94 aa14.19□□□□□ -0.14
TSPAN4-205ENST00000397406 YIPF5Q969M3 257 aa14.19□□□□□ -0.14
TSPAN4-205ENST00000397406 CCDC32Q9BV29 185 aa14.19□□□□□ -0.14
TSPAN4-205ENST00000397406 NLKQ9UBE8 527 aa14.19□□□□□ -0.14
TSPAN4-205ENST00000397406 FLNAP21333 2647 aaKnown RBP14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 IGHV3OR15-7A0A075B7D8 119 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 MEIOCA2RUB1 952 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 CSF3P09919 207 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 HOXB4P17483 251 aaPredicted RBP14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 FUT3P21217 361 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 COL8A2P25067 703 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 MRPS10P82664 201 aaKnown RBP14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 BAK1Q16611 211 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 NKAPLQ5M9Q1 402 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 TEX36Q5VZQ5 186 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 C1orf87Q8N0U7 546 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 CIARTQ8N365 385 aaPredicted RBP14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 C19orf18Q8NEA5 215 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 SMIM4Q8WVI0 70 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 NEDD4LQ96PU5 975 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 SULT4A1Q9BR01 284 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 CXorf56Q9H5V9 222 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 SEBOXQ9HB31 216 aaPredicted RBP14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 PLEKHJ1Q9NW61 149 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 WIPI2Q9Y4P8 454 aa14.18□□□□□ -0.14
TSPAN4-205ENST00000397406 TRAV24A0A0B4J272 114 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 RFPL4AA6NLU0 287 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 OR2AT4A6NND4 320 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 RFPL4AL1F8VTS6 287 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 LYNX1G3V0Z9 82 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 GABARAPH6UMI1 98 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 SH2D1BO14796 132 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 RP2O75695 350 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 OR2H2O95918 312 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 HAND1O96004 215 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 LYNX1P0DP58 116 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 PSG2P11465 335 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 LMO1P25800 156 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 PRSS3P35030 304 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 CEBPDP49716 269 aaPredicted RBP14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 MRPS11P82912 194 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 GUCA2AQ02747 115 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 SCN1BQ07699 218 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 ARL6IP1Q15041 203 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 ATAD3CQ5T2N8 411 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 HACD4Q5VWC8 232 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 BRICD5Q6PL45 260 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 OR52I2Q8NH67 350 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 TRIM63Q969Q1 353 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 SPACA1Q9HBV2 294 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms