RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 PIPOXQ9P0Z9 390 aa10.99□□□□□ -0.65
SMU1-201ENST00000397149 C11orf94C9JXX5 98 aa10.99□□□□□ -0.65
SMU1-201ENST00000397149 CD1EP15812 388 aa10.99□□□□□ -0.65
SMU1-201ENST00000397149 CIRBPQ14011 172 aaKnown RBP10.99□□□□□ -0.65
SMU1-201ENST00000397149 C10orf113Q5VZT2 155 aa10.99□□□□□ -0.65
SMU1-201ENST00000397149 OR4D9Q8NGE8 314 aa10.99□□□□□ -0.65
SMU1-201ENST00000397149 HMGN4O00479 90 aa10.99□□□□□ -0.65
SMU1-201ENST00000397149 MBTPS2O43462 519 aa10.99□□□□□ -0.65
SMU1-201ENST00000397149 MMP15P51511 669 aa10.99□□□□□ -0.65
SMU1-201ENST00000397149 RNF165Q6ZSG1 346 aa10.99□□□□□ -0.65
SMU1-201ENST00000397149 ZNF418Q8TF45 676 aaPredicted RBP10.99□□□□□ -0.65
SMU1-201ENST00000397149 NTNG2Q96CW9 530 aa10.99□□□□□ -0.65
SMU1-201ENST00000397149 MS4A6EQ96DS6 147 aa10.99□□□□□ -0.65
SMU1-201ENST00000397149 ADTRPQ96IZ2 230 aa10.99□□□□□ -0.65
SMU1-201ENST00000397149 PRRX2Q99811 253 aa10.99□□□□□ -0.65
SMU1-201ENST00000397149 CYB5R1Q9UHQ9 305 aa10.99□□□□□ -0.65
SMU1-201ENST00000397149 OR5AC1P0C628 307 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 SPRED3Q2MJR0 410 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 MPV17LQ2QL34 196 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 ZNF680Q8NEM1 530 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 OR2T10Q8NGZ9 312 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 PERPQ96FX8 193 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 HDHD3Q9BSH5 251 aaPredicted RBP10.98□□□□□ -0.65
SMU1-201ENST00000397149 TUBA4BQ9H853 241 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 HS3ST3A1Q9Y663 406 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 TMEM131LA2VDJ0 1609 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 FCGR2BP31994 310 aaPredicted RBP10.98□□□□□ -0.65
SMU1-201ENST00000397149 MRPS11P82912 194 aaKnown RBP10.98□□□□□ -0.65
SMU1-201ENST00000397149 C3AR1Q16581 482 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 LIAT1Q6ZQX7 453 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 TMEM183AQ8IXX5 376 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 LMO3Q8TAP4 145 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 TPRP12270 2363 aaKnown RBP10.98□□□□□ -0.65
SMU1-201ENST00000397149 FFAR1O14842 300 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 TMIGD3P0DMS9 266 aaPredicted RBP10.98□□□□□ -0.65
SMU1-201ENST00000397149 ZNF774Q6NX45 483 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 OR2W3Q7Z3T1 314 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 CD99P14209 185 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 KRTCAP3Q53RY4 240 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 MORN4Q8NDC4 146 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 CMC2Q9NRP2 79 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 HILPDAQ9Y5L2 63 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 PRR32B1ATL7 298 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 B4DEV8 164 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 PDE6DO43924 150 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 KIR2DS2P43631 304 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 PELI3Q8N2H9 469 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 SYT8Q8NBV8 401 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 R4GN57 208 aa10.98□□□□□ -0.65
SMU1-201ENST00000397149 FABP2P12104 132 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 DSCR4P56555 118 aaPredicted RBP10.97□□□□□ -0.65
SMU1-201ENST00000397149 RND1Q92730 232 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 TEX37Q96LM6 180 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 MMP26Q9NRE1 261 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 LRP12Q9Y561 859 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 KCNE3Q9Y6H6 103 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 RBFOX2O43251 390 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMU1-201ENST00000397149 GPX5O75715 221 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 TFAP2AP05549 437 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 DIO1P49895 249 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 BSXQ3C1V8 233 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 MRGPRX4Q96LA9 322 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 FCMRO60667 390 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 OR10J6PQ8NGY7 276 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 SLC35B3Q9H1N7 401 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 GEMIN7Q9H840 131 aaKnown RBP10.97□□□□□ -0.65
SMU1-201ENST00000397149 A0A1W2PPE3 182 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 MCHR2Q969V1 340 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 R3HDM4Q96D70 268 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 LINC00470Q9BZP3 86 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 ROBO1Q9Y6N7 1651 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 MYH7BA7E2Y1 1941 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 EML2O95834 649 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 PF4P02776 101 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 PSG6Q00889 435 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 CTU2Q2VPK5 515 aaKnown RBP10.97□□□□□ -0.65
SMU1-201ENST00000397149 TSPO2Q5TGU0 170 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 DNAJB12Q9NXW2 375 aaKnown RBP10.97□□□□□ -0.65
SMU1-201ENST00000397149 EXOGQ9Y2C4 368 aaKnown RBP10.97□□□□□ -0.65
SMU1-201ENST00000397149 SMAD7O15105 426 aaKnown RBP10.97□□□□□ -0.65
SMU1-201ENST00000397149 POLR2GP62487 172 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMU1-201ENST00000397149 GGTA1PQ4G0N0 100 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 NSUN5P2Q63ZY6 315 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 SAXO2Q658L1 398 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 STXBP6Q8NFX7 210 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 C1RLQ9NZP8 487 aa10.97□□□□□ -0.65
SMU1-201ENST00000397149 B4GALNT1Q00973 533 aa10.96□□□□□ -0.65
SMU1-201ENST00000397149 C2orf83Q53S99 150 aa10.96□□□□□ -0.65
SMU1-201ENST00000397149 MRM1Q6IN84 353 aaKnown RBP10.96□□□□□ -0.65
SMU1-201ENST00000397149 PET117Q6UWS5 81 aa10.96□□□□□ -0.65
SMU1-201ENST00000397149 VN1R2Q8NFZ6 395 aa10.96□□□□□ -0.65
SMU1-201ENST00000397149 TMEM167BQ9NRX6 74 aa10.96□□□□□ -0.65
SMU1-201ENST00000397149 MOGAT3Q86VF5 341 aa10.96□□□□□ -0.65
SMU1-201ENST00000397149 ST8SIA1Q92185 356 aa10.96□□□□□ -0.65
SMU1-201ENST00000397149 SMIM19Q96E16 107 aa10.96□□□□□ -0.65
SMU1-201ENST00000397149 SPAG17Q6Q759 2223 aa10.96□□□□□ -0.65
SMU1-201ENST00000397149 TRAV17A0A0B4J275 112 aa10.96□□□□□ -0.65
SMU1-201ENST00000397149 GCAP28676 217 aa10.96□□□□□ -0.65
SMU1-201ENST00000397149 ZNF383Q8NA42 475 aa10.96□□□□□ -0.65
SMU1-201ENST00000397149 RPS4Y2Q8TD47 263 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms