RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 PLK3Q9H4B4 646 aa12.84□□□□□ -0.35
RAPGEF4-201ENST00000397081 UNKLQ9H9P5 680 aaKnown RBP12.84□□□□□ -0.35
RAPGEF4-201ENST00000397081 B3GAT1Q9P2W7 334 aa12.84□□□□□ -0.35
RAPGEF4-201ENST00000397081 HSF4Q9ULV5 492 aa12.84□□□□□ -0.35
RAPGEF4-201ENST00000397081 NCOA6Q14686 2063 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF4-201ENST00000397081 RBFOX3A6NFN3 312 aa12.84□□□□□ -0.35
RAPGEF4-201ENST00000397081 MLF1P58340 268 aa12.84□□□□□ -0.35
RAPGEF4-201ENST00000397081 DLK1P80370 383 aa12.84□□□□□ -0.35
RAPGEF4-201ENST00000397081 MAML2Q8IZL2 1156 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF4-201ENST00000397081 CACNA1GO43497 2377 aa12.84□□□□□ -0.35
RAPGEF4-201ENST00000397081 DENND4AQ7Z401 1863 aa12.83□□□□□ -0.35
RAPGEF4-201ENST00000397081 IGKV3D-11A0A0A0MRZ8 115 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 IGHV1OR15-9A0A0B4J2B8 117 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 C3orf80F5H4A9 247 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 TRGC2P03986 189 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 MMP9P14780 707 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 GABRA4P48169 554 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 PLPPR5Q32ZL2 321 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 OR8G2PQ6IF36 304 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 OSR2Q8N2R0 312 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 SHDQ96IW2 340 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 MEGF10Q96KG7 1140 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 C19orf25Q9UFG5 118 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 TGIF2-C20orf24A0A0A6YYL0 155 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 TERTO14746 1132 aaKnown RBP12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 SRSF10O75494 262 aaKnown RBP12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 AAED1Q7RTV5 226 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 SNX22Q96L94 193 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 BCO1Q9HAY6 547 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 DYNLT3P51808 116 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 LRP11Q86VZ4 500 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 LINC00469Q8N7U9 141 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 PP6455Q8WZ26 134 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 DOK5Q9P104 306 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 GPR179Q6PRD1 2367 aa12.83□□□□□ -0.36
RAPGEF4-201ENST00000397081 CCDC187A0A096LP49 1063 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 PIAS2O75928 621 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 KLK3P07288 261 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 OTX2P32243 289 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 THBS4P35443 961 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 DPPA2Q7Z7J5 298 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 ZNF32P17041 273 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 P2RY1P47900 373 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 SPEM2Q0P670 501 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 ZNF880Q6PDB4 577 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 LIAT1Q6ZQX7 453 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 ZNF610Q8N9Z0 462 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 MARS2Q96GW9 593 aaKnown RBP12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 RASL10BQ96S79 203 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 GGACTQ9BVM4 153 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 C5orf52A6NGY3 159 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 CXCL13O43927 109 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 TCN2P20062 427 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 FAM3AP98173 230 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 RPUSD4Q96CM3 377 aaKnown RBP12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 SPIN2AQ99865 258 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 SPIN2BQ9BPZ2 258 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 CXorf65A6NEN9 183 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 CD5P06127 495 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 TCEAL6Q6IPX3 200 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 OR6X1Q8NH79 312 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 SPACA9Q96E40 222 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 LYZL4Q96KX0 146 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 SLC25A31Q9H0C2 315 aa12.82□□□□□ -0.36
RAPGEF4-201ENST00000397081 CFAP54Q96N23 3096 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 TRBV6-7A0A0A0MS04 114 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 C3orf85A0A1B0GTC6 90 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 IFI6P09912 130 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 HAAOP46952 286 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 GFI1BQ5VTD9 330 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 OR51M1Q9H341 326 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 PLA2G2EQ9NZK7 142 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 PMS2P1A4D2B8 440 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 CRYM-AS1A6NIL9 109 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 SOX15O60248 233 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 EIF1BO60739 113 aaKnown RBP12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 GALNSP34059 522 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 EIF1P41567 113 aaKnown RBP12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 TP53RKQ96S44 253 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 ZNF587BE7ETH6 402 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 BCAT2O15382 392 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 PHYHD1Q5SRE7 291 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 NSUN5P2Q63ZY6 315 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 CHST5Q9GZS9 411 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 SLC7A10Q9NS82 523 aa12.81□□□□□ -0.36
RAPGEF4-201ENST00000397081 ROS1P08922 2347 aa12.8□□□□□ -0.36
RAPGEF4-201ENST00000397081 CHST1O43916 411 aa12.8□□□□□ -0.36
RAPGEF4-201ENST00000397081 OR8U8P0C7N1 319 aa12.8□□□□□ -0.36
RAPGEF4-201ENST00000397081 DANCRP0C864 163 aa12.8□□□□□ -0.36
RAPGEF4-201ENST00000397081 RND3P61587 244 aa12.8□□□□□ -0.36
RAPGEF4-201ENST00000397081 CFHR1Q03591 330 aa12.8□□□□□ -0.36
RAPGEF4-201ENST00000397081 SRSF4Q08170 494 aaKnown RBP12.8□□□□□ -0.36
RAPGEF4-201ENST00000397081 SPANXN5Q5MJ07 72 aa12.8□□□□□ -0.36
RAPGEF4-201ENST00000397081 GUSBP11Q6P575 273 aa12.8□□□□□ -0.36
RAPGEF4-201ENST00000397081 UFSP2Q9NUQ7 469 aa12.8□□□□□ -0.36
RAPGEF4-201ENST00000397081 PPP1R3CQ9UQK1 317 aa12.8□□□□□ -0.36
RAPGEF4-201ENST00000397081 STRAPQ9Y3F4 350 aaKnown RBP12.8□□□□□ -0.36
RAPGEF4-201ENST00000397081 SMCO3A2RU48 225 aa12.8□□□□□ -0.36
RAPGEF4-201ENST00000397081 SEC11BP0C7V7 166 aa12.8□□□□□ -0.36
RAPGEF4-201ENST00000397081 ZNF17P17021 662 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms