RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.97□□□□□ -0.81
SMAD9-202ENST00000379826 OR52M1Q8NGK5 317 aa9.97□□□□□ -0.81
SMAD9-202ENST00000379826 OR6X1Q8NH79 312 aa9.97□□□□□ -0.81
SMAD9-202ENST00000379826 ZMAT5Q9UDW3 170 aaKnown RBP9.97□□□□□ -0.81
SMAD9-202ENST00000379826 BTBD17A6NE02 478 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 CXCL13O43927 109 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 PIAS2O75928 621 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 MBPP02686 304 aaPredicted RBP9.96□□□□□ -0.81
SMAD9-202ENST00000379826 PGA4P0DJD7 388 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 PGA3P0DJD8 388 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 CST9LP1Q5W188 147 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 TMEM211Q6ICI0 200 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 FIP1L1Q6UN15 594 aaKnown RBP9.96□□□□□ -0.81
SMAD9-202ENST00000379826 SLC35G3Q8N808 338 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 TMEM105Q8N8V8 129 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 POC1AQ8NBT0 407 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 TIMM10BQ9Y5J6 103 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 NKX2-6A6NCS4 301 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 H0YIZ8 118 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 HNF1AP20823 631 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 SPANXN5Q5MJ07 72 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 FNDC7Q5VTL7 733 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 ZNF383Q8NA42 475 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 OR1F12Q8NHA8 337 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 HIST1H2BAQ96A08 127 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 RPUSD4Q96CM3 377 aaKnown RBP9.96□□□□□ -0.81
SMAD9-202ENST00000379826 KCNIP1Q9NZI2 227 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 HDGFL3Q9Y3E1 203 aa9.96□□□□□ -0.81
SMAD9-202ENST00000379826 FBP1P09467 338 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 KLK2P20151 261 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 ZNF528Q3MIS6 628 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 PAQR4Q8N4S7 273 aaPredicted RBP9.96□□□□□ -0.82
SMAD9-202ENST00000379826 LILRB1Q8NHL6 650 aaPredicted RBP9.96□□□□□ -0.82
SMAD9-202ENST00000379826 EXTL1Q92935 676 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 RAXQ9Y2V3 346 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 EPHA8P29322 1005 aaPredicted RBP9.96□□□□□ -0.82
SMAD9-202ENST00000379826 DLK1P80370 383 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 EWSR1Q01844 656 aaKnown RBP eCLIP9.96□□□□□ -0.82
SMAD9-202ENST00000379826 TBC1D26Q86UD7 250 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 OR2C3Q8N628 320 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 SLC2A9Q9NRM0 540 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 A0A0A6YYD4 124 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 A0A1B0GTQ1 180 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 TMEM14DPA8MWL7 114 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 WISP1O95388 367 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 IGHMP01871 453 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 CLPSP04118 112 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 ADCYAP1P18509 176 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 MESP1Q9BRJ9 268 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 C12orf49Q9H741 205 aa9.96□□□□□ -0.82
SMAD9-202ENST00000379826 CARHSP1Q9Y2V2 147 aaKnown RBP9.96□□□□□ -0.82
SMAD9-202ENST00000379826 SIRPB1O00241 398 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 NAT2P11245 290 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 CD82P27701 267 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 ZP4Q12836 540 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 GUSBP11Q6P575 273 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 BMPERQ8N8U9 685 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 WASF3Q9UPY6 502 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 P2RY1P47900 373 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 PMS2CLQ68D20 193 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 OR4A4PQ8NGN8 299 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 GNPNAT1Q96EK6 184 aaPredicted RBP9.95□□□□□ -0.82
SMAD9-202ENST00000379826 ZNF385AQ96PM9 386 aaKnown RBP9.95□□□□□ -0.82
SMAD9-202ENST00000379826 IFI6P09912 130 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 COMMD1Q8N668 190 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 OIT3Q8WWZ8 545 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 ZNF524Q96C55 264 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 POMT1Q9Y6A1 747 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 WSB1Q9Y6I7 421 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 H3BQ15 152 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 IGKV3-11P04433 115 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 ZNF32P17041 273 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 STARD6P59095 220 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 SCGB2A2Q13296 93 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 IL13RA2Q14627 380 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 CEACAM16Q2WEN9 425 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 PLPPR5Q32ZL2 321 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 LIAT1Q6ZQX7 453 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 NANOS1Q8WY41 292 aaKnown RBP9.95□□□□□ -0.82
SMAD9-202ENST00000379826 PSENENQ9NZ42 101 aa9.95□□□□□ -0.82
SMAD9-202ENST00000379826 F5P12259 2224 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 ZNF708P17019 499 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 UBAC2Q8NBM4 344 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 APCDD1LQ8NCL9 501 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 TMEM230Q96A57 120 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 FAM234AQ9H0X4 552 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 MDKP21741 143 aaPredicted RBP9.94□□□□□ -0.82
SMAD9-202ENST00000379826 FUT6P51993 359 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 SURF2Q15527 256 aaPredicted RBP9.94□□□□□ -0.82
SMAD9-202ENST00000379826 KIAA1549LQ6ZVL6 1849 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 DHRS7CA6NNS2 312 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 FTCDNL1E5RQL4 147 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 RAMP1O60894 148 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 DFFBO76075 338 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 CELA2AP08217 269 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 PPP1CCP36873 323 aaKnown RBP9.94□□□□□ -0.82
SMAD9-202ENST00000379826 SNCAP37840 140 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 CYB561P49447 251 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 RUNX1Q01196 453 aa9.94□□□□□ -0.82
SMAD9-202ENST00000379826 SNAI3Q3KNW1 292 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms