RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 HRH1P35367 487 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 LSM6P62312 80 aaKnown RBP10.63□□□□□ -0.71
VRK3-202ENST00000377011 BSPH1Q075Z2 132 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 TAF13Q15543 124 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 NKPD1Q17RQ9 610 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 PAN3Q58A45 887 aaKnown RBP10.63□□□□□ -0.71
VRK3-202ENST00000377011 KRTAP1-3Q8IUG1 177 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 TMEM123Q8N131 208 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 INO80EQ8NBZ0 244 aaPredicted RBP10.63□□□□□ -0.71
VRK3-202ENST00000377011 OR4K15Q8NH41 348 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 STOML3Q8TAV4 291 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 OR51E1Q8TCB6 317 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 NUDCD2Q8WVJ2 157 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 C1orf147Q96MC9 270 aaPredicted RBP10.63□□□□□ -0.71
VRK3-202ENST00000377011 OCSTAMPQ9BR26 566 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 URM1Q9BTM9 101 aaKnown RBP10.63□□□□□ -0.71
VRK3-202ENST00000377011 SEC61A2Q9H9S3 476 aa10.63□□□□□ -0.71
VRK3-202ENST00000377011 BARX1Q9HBU1 254 aaPredicted RBP10.63□□□□□ -0.71
VRK3-202ENST00000377011 A0A096LPE4 126 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 A0A1W2PPZ6 126 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 CDC14BO60729 498 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 IGLV3-1P01715 115 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 ZNF83P51522 516 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 ZNF133P52736 654 aaPredicted RBP10.62□□□□□ -0.71
VRK3-202ENST00000377011 NAAAQ02083 359 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 PPA1Q15181 289 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 TMEM128Q5BJH2 165 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 NCMAPQ5T1S8 102 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 ADAM5Q6NVV9 412 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 GLIPR1L1Q6UWM5 242 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 Q6ZSR3 168 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 FOXL2NBQ6ZUU3 175 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 MYPOPQ86VE0 399 aaPredicted RBP10.62□□□□□ -0.71
VRK3-202ENST00000377011 ZNF101Q8IZC7 436 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 OR8B12Q8NGG6 310 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 TERB2Q8NHR7 220 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 C10orf35Q96D05 121 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 RAB3CQ96E17 227 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 ARPC5LQ9BPX5 153 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 SELENOIQ9C0D9 397 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 PNRC2Q9NPJ4 139 aaKnown RBP10.62□□□□□ -0.71
VRK3-202ENST00000377011 TAS2R3Q9NYW6 316 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 ZNF230Q9UIE0 474 aaPredicted RBP10.62□□□□□ -0.71
VRK3-202ENST00000377011 KCNK7Q9Y2U2 307 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 RTTNQ86VV8 2226 aa10.62□□□□□ -0.71
VRK3-202ENST00000377011 SETD2Q9BYW2 2564 aaPredicted RBP10.62□□□□□ -0.71
VRK3-202ENST00000377011 OR2AT4A6NND4 320 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 ZNF726A6NNF4 738 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 CNOT4O95628 575 aaKnown RBP10.61□□□□□ -0.71
VRK3-202ENST00000377011 APOC3P02656 99 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 CSN2P05814 226 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 GNB3P16520 340 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 ZNF43P17038 809 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 FPR2P25090 351 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 THBS4P35443 961 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 ZNF121P58317 390 aaPredicted RBP10.61□□□□□ -0.71
VRK3-202ENST00000377011 BEX5Q5H9J7 111 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 C17orf107Q6ZR85 190 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 ABHD12BQ7Z5M8 362 aaPredicted RBP10.61□□□□□ -0.71
VRK3-202ENST00000377011 PEG10Q86TG7 708 aaKnown RBP10.61□□□□□ -0.71
VRK3-202ENST00000377011 FAM89BQ8N5H3 189 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 GVQW1Q8N7I0 195 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 PNLDC1Q8NA58 520 aaKnown RBP10.61□□□□□ -0.71
VRK3-202ENST00000377011 CLRN3Q8NCR9 226 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 IGFBPL1Q8WX77 278 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 MARC2Q969Z3 335 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 CMBLQ96DG6 245 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 TMEM59Q9BXS4 323 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 RAB18Q9NP72 206 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 GPR84Q9NQS5 396 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 PCDHB16Q9NRJ7 776 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 MYEF2Q9P2K5 600 aaKnown RBP10.61□□□□□ -0.71
VRK3-202ENST00000377011 TEX13DA0A0J9YY54 714 aaPredicted RBP10.61□□□□□ -0.71
VRK3-202ENST00000377011 A0A0U1RQV5 110 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 SHISA9B4DS77 424 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 F8VVB4 439 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 F8VWA3 439 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 DNASE2O00115 360 aaPredicted RBP10.61□□□□□ -0.71
VRK3-202ENST00000377011 MFNGO00587 321 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 VAMP5O95183 116 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 APOC1P02654 83 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 LYL1P12980 280 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 PSMB6P28072 239 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 ECI1P42126 302 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 LUMP51884 338 aaPredicted RBP10.61□□□□□ -0.71
VRK3-202ENST00000377011 ATP1B3P54709 279 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 TAS2R46P59540 309 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 FLI1Q01543 452 aaPredicted RBP10.61□□□□□ -0.71
VRK3-202ENST00000377011 ECH1Q13011 328 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 SURF2Q15527 256 aaPredicted RBP10.61□□□□□ -0.71
VRK3-202ENST00000377011 TIMM23BQ5SRD1 257 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 C10orf128Q5T292 105 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 OR52W1Q6IF63 320 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 OR1K1Q8NGR3 316 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 ZNF416Q9BWM5 594 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 ZNF471Q9BX82 626 aaPredicted RBP10.61□□□□□ -0.71
VRK3-202ENST00000377011 PARPBPQ9NWS1 579 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 GPR132Q9UNW8 380 aa10.61□□□□□ -0.71
VRK3-202ENST00000377011 NF1P21359 2839 aa10.6□□□□□ -0.71
VRK3-202ENST00000377011 ANK3Q12955 4377 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms