RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 LRRK1Q38SD2 2015 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 RNF224P0DH78 156 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 CDX1P47902 265 aaPredicted RBP13.66□□□□□ -0.22
COL5A1-201ENST00000371817 MRGPREQ86SM8 312 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 A0A0B4J293 547 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 THBS4P35443 961 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 FHITP49789 147 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 MUC15Q8N387 334 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 RBPJLQ9UBG7 517 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 IGHV3-9P01782 118 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 ZNF766Q5HY98 468 aa13.66□□□□□ -0.22
COL5A1-201ENST00000371817 NPPBP16860 134 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 MMP16P51512 607 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 CAMKMTQ7Z624 323 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 ORAI1Q96D31 301 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 SCRG1O75711 98 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 SURF2Q15527 256 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-201ENST00000371817 ZMIZ1Q9ULJ6 1067 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 M0QZQ0 153 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 RECKO95980 971 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 FAHP16930 419 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 TTC9BQ8N6N2 239 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 RGP1Q92546 391 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-201ENST00000371817 RPEQ96AT9 228 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 CYR61O00622 381 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 DNAL4O96015 105 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 SAPCD1Q5SSQ6 148 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 Q8IYB0 196 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 SLC45A1Q9Y2W3 748 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 PHIPQ8WWQ0 1821 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 JMJD6Q6NYC1 403 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-201ENST00000371817 CYB561D1Q8N8Q1 229 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 OR8B3Q8NGG8 313 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 C1QTNF6Q9BXI9 259 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 ELF5Q9UKW6 265 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-201ENST00000371817 HOXC13P31276 330 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 ZNF841Q6ZN19 808 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 LRP12Q9Y561 859 aa13.65□□□□□ -0.22
COL5A1-201ENST00000371817 SLC17A3O00476 420 aa13.65□□□□□ -0.23
COL5A1-201ENST00000371817 WBP2Q969T9 261 aa13.65□□□□□ -0.23
COL5A1-201ENST00000371817 SPSB1Q96BD6 273 aa13.65□□□□□ -0.23
COL5A1-201ENST00000371817 TMEM38BQ9NVV0 291 aa13.65□□□□□ -0.23
COL5A1-201ENST00000371817 GSTZ1O43708 216 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-201ENST00000371817 SLC25A17O43808 307 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 IL4P05112 153 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 RNASE1P07998 156 aaKnown RBP13.64□□□□□ -0.23
COL5A1-201ENST00000371817 DRD1P21728 446 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 FIZ1Q96SL8 496 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 C16orf70Q9BSU1 422 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 ORM2P19652 201 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 RHBDD2Q6NTF9 364 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 RTN4RL1Q86UN2 441 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-201ENST00000371817 GSN-AS1Q9NRJ2 163 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 NEU3Q9UQ49 428 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 HFEQ30201 348 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 SCD5Q86SK9 330 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 ZNF740Q8NDX6 193 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 ABHD3Q8WU67 409 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 KTI12Q96EK9 354 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-201ENST00000371817 DERL1Q9BUN8 251 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 LEPROTL1O95214 131 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 PSG5Q15238 335 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 VMA21Q3ZAQ7 101 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 ASB16Q96NS5 453 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 KDM3BQ7LBC6 1761 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 SPRY1O43609 319 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-201ENST00000371817 FAM157CP0CG43 387 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 PCMT1P22061 227 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 CLEC18BQ6UXF7 455 aa13.64□□□□□ -0.23
COL5A1-201ENST00000371817 CTAG1AP78358 180 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 ZNF124Q15973 351 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 TP53I13Q8NBR0 393 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-201ENST00000371817 NAT6Q93015 286 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 KISS1Q15726 138 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 EPHA8P29322 1005 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-201ENST00000371817 GUCA2BQ16661 112 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 BCORP1Q8N888 145 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 OTOSQ8NHW6 89 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 PIAS3Q9Y6X2 628 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 MFAP2P55001 183 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 POLR2GP62487 172 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL5A1-201ENST00000371817 MUC1P15941 1255 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-201ENST00000371817 SLC25A42Q86VD7 318 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 H1FOOQ8IZA3 346 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-201ENST00000371817 INSM2Q96T92 566 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-201ENST00000371817 HSD17B10Q99714 261 aaKnown RBP13.63□□□□□ -0.23
COL5A1-201ENST00000371817 TMEM40Q8WWA1 233 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 ANAPC13Q9BS18 74 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 RCC2Q9P258 522 aaKnown RBP13.63□□□□□ -0.23
COL5A1-201ENST00000371817 C19orf53Q9UNZ5 99 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-201ENST00000371817 DOCK3Q8IZD9 2030 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 PTP4A3O75365 173 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 ST8SIA1Q92185 356 aa13.63□□□□□ -0.23
COL5A1-201ENST00000371817 ERRFI1Q9UJM3 462 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-201ENST00000371817 HLA-DRB1P01911 266 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 CTSSP25774 331 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 H3BNC9 293 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 CA1P00915 261 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-201ENST00000371817 IGHEP01854 428 aa13.62□□□□□ -0.23
COL5A1-201ENST00000371817 RELQ04864 619 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms