RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 COMMD4Q9H0A8 199 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 ATG5Q9H1Y0 275 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 EXO5Q9H790 373 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 WDR76Q9H967 626 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 ELOVL3Q9HB03 270 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 TMEM138Q9NPI0 162 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 CYTL1Q9NRR1 136 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 TMEM100Q9NV29 134 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 TAS2R3Q9NYW6 316 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 GDE1Q9NZC3 331 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 DUX4Q9UBX2 424 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 IKZF2Q9UKS7 526 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 B9D1Q9UPM9 204 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 ERVK-19Q9WJR5 959 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 SLC22A13Q9Y226 551 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 CARHSP1Q9Y2V2 147 aaKnown RBP2.83□□□□□ -1.96
PTPRK-202ENST00000368205 RHBDD3Q9Y3P4 386 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 MRPS18BQ9Y676 258 aaKnown RBP2.83□□□□□ -1.96
PTPRK-202ENST00000368205 TMEM131Q92545 1883 aa2.83□□□□□ -1.96
PTPRK-202ENST00000368205 CPAMD8Q8IZJ3 1885 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 C2orf16Q68DN1 1984 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 IGLV4-3A0A075B6K6 122 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 TRBV6-7A0A0A0MS04 114 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 A0A0A6YYH2 397 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 IGLV1-36A0A0B4J1U3 117 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 A0A0J9YY10 115 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 KANTRA0A1W2PQU2 76 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 C9orf170A2RU37 121 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 A6NJ64 397 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 DISC1C4P0D8 188 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 H7C1C5 153 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 GPR31O00270 319 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 CCSO14618 274 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 PHYHO14832 338 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 SLC31A1O15431 190 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 PHF1O43189 567 aaPredicted RBP2.82□□□□□ -1.96
PTPRK-202ENST00000368205 CDC40O60508 579 aaKnown RBP eCLIP2.82□□□□□ -1.96
PTPRK-202ENST00000368205 RDH16O75452 317 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 APBB3O95704 486 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 RENP00797 406 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 CLPSP04118 112 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 PNMTP11086 282 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 LIPCP11150 499 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 SPTBP11277 2137 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 VPREB1P12018 145 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 CCL5P13501 91 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 ADCYAP1P18509 176 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 FCARP24071 287 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 HTR2CP28335 458 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 CD34P28906 385 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 RORAP35398 523 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 PTGER4P35408 488 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 RPS27P42677 84 aaKnown RBP2.82□□□□□ -1.96
PTPRK-202ENST00000368205 RPL35P42766 123 aaKnown RBP2.82□□□□□ -1.96
PTPRK-202ENST00000368205 NPBWR1P48145 328 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 RAB13P51153 203 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 ATP1B3P54709 279 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 PRMT2P55345 433 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 ACTBP60709 375 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 LCN6P62502 163 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 ACTG1P63261 375 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 NDPQ00604 133 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 RPL18Q07020 188 aaKnown RBP2.82□□□□□ -1.96
PTPRK-202ENST00000368205 ZNF415Q09FC8 603 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 RASGEF1BQ0VAM2 473 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 FUT7Q11130 342 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 SRSF5Q13243 272 aaKnown RBP2.82□□□□□ -1.96
PTPRK-202ENST00000368205 SKP2Q13309 424 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 RUNX3Q13761 415 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 SNTB1Q13884 538 aaKnown RBP2.82□□□□□ -1.96
PTPRK-202ENST00000368205 PDGFRLQ15198 375 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 ZNHIT3Q15649 155 aaPredicted RBP2.82□□□□□ -1.96
PTPRK-202ENST00000368205 MEP1BQ16820 701 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 HYAL4Q2M3T9 481 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 ZNF528Q3MIS6 628 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 CDNFQ49AH0 187 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 TEX30Q5JUR7 227 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 OTPQ5XKR4 325 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 ZNF776Q68DI1 518 aaPredicted RBP2.82□□□□□ -1.96
PTPRK-202ENST00000368205 TMEM225Q6GV28 225 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 LPCAT3Q6P1A2 487 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 C11orf88Q6PI97 169 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 TMEM184AQ6ZMB5 413 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 NUP54Q7Z3B4 507 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 CACUL1Q86Y37 369 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 CCDC36Q8IYA8 594 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 ZNF679Q8IYX0 411 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 BPIFB2Q8N4F0 458 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 C10orf53Q8N6V4 93 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 ZNF615Q8N8J6 731 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 ZDHHC22Q8N966 263 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 SLC30A7Q8NEW0 376 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 OR4A4PQ8NGN8 299 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 OR9A4Q8NGU2 314 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 OR6N2Q8NGY6 317 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 OTOSQ8NHW6 89 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 MITD1Q8WV92 249 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 PPP1R1CQ8WVI7 109 aa2.82□□□□□ -1.96
PTPRK-202ENST00000368205 TSEN15Q8WW01 171 aaKnown RBP2.82□□□□□ -1.96
PTPRK-202ENST00000368205 AQP3Q92482 292 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms