RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 GDF6Q6KF10 455 aaPredicted RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 OR51Q1Q8NH59 317 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 PRELID3AQ96N28 172 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF850A8MQ14 1090 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 OR1D4P47884 311 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 ISOC2Q96AB3 205 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 C4orf45Q96LM5 186 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 OR2A5Q96R48 311 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 C1RLQ9NZP8 487 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 ABCA7Q8IZY2 2146 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 A0A0G2JLL6 359 aaPredicted RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 OR2T8A6NH00 312 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 PLAUP00749 431 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 FURINP09958 794 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 IRF2P14316 349 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 CCDC144NLQ6NUI1 221 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 PRRT2Q7Z6L0 340 aaPredicted RBP3.34□□□□□ -1.87
SYNE1-207ENST00000367255 G6PC2Q9NQR9 355 aa3.34□□□□□ -1.87
SYNE1-207ENST00000367255 MYH15Q9Y2K3 1946 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 HSBP1O75506 76 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 IZUMO4Q1ZYL8 232 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 C16orf82Q7Z2V1 217 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM222Q9H0R3 208 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 NPSP0C0P6 89 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF791Q3KP31 576 aaPredicted RBP3.34□□□□□ -1.88
SYNE1-207ENST00000367255 LYPD8Q6UX82 237 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 LYPD1Q8N2G4 141 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 SLAMF6Q96DU3 332 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 P2RX1P51575 399 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 MGAT3Q09327 533 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 SLCO4C1Q6ZQN7 724 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 CHAC1Q9BUX1 264 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 MSL2Q9HCI7 577 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 NTN1O95631 604 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 MEF2CQ06413 473 aaPredicted RBP3.34□□□□□ -1.88
SYNE1-207ENST00000367255 CIRBPQ14011 172 aaKnown RBP3.34□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF141Q15928 474 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 METTL27Q8N6F8 245 aaPredicted RBP3.34□□□□□ -1.88
SYNE1-207ENST00000367255 THEM6Q8WUY1 208 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 BLNKQ8WV28 456 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 FAM122AQ96E09 287 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 OR2S2Q9NQN1 319 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 AP5S1Q9NUS5 200 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 TRAV20A0A0B4J274 112 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 SHC1P29353 583 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 GABRA3P34903 492 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 SPINT3P49223 89 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 NMUP48645 174 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 CYB561P49447 251 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 EMP2P54851 167 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 GUCA2AQ02747 115 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 LRRC10Q5BKY1 277 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 DERL3Q96Q80 235 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 RAB1BQ9H0U4 201 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 CCL7P80098 99 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF658BQ4V348 819 aaPredicted RBP3.34□□□□□ -1.88
SYNE1-207ENST00000367255 NXF5Q9H1B4 397 aaKnown RBP3.34□□□□□ -1.88
SYNE1-207ENST00000367255 ING1Q9UK53 422 aaPredicted RBP3.34□□□□□ -1.88
SYNE1-207ENST00000367255 RCC1P18754 421 aaPredicted RBP3.34□□□□□ -1.88
SYNE1-207ENST00000367255 CTSCP53634 463 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 TREML2Q5T2D2 321 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 OR10J5Q8NHC4 309 aa3.34□□□□□ -1.88
SYNE1-207ENST00000367255 CXCL14O95715 111 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 IGLV3-27P01718 113 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 PPIAP62937 165 aaKnown RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 PTOV1Q86YD1 416 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 DRAM1Q8N682 238 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 CACNG5Q9UF02 275 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 ARG1P05089 322 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 CARD18P57730 90 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 TNFAIP6P98066 277 aaPredicted RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 HLA-DRB5Q30154 266 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 GATAD1Q8WUU5 269 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM126AQ9H061 195 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 PHLDA2Q53GA4 152 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 ACSM6Q6P461 480 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 GDF7Q7Z4P5 450 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 IMUPQ9GZP8 106 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 PGPEP1Q9NXJ5 209 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 LTBRP36941 435 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 BOKQ9UMX3 212 aaPredicted RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF468Q5VIY5 522 aaPredicted RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 BHLHE23Q8NDY6 225 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 THAP3Q8WTV1 239 aaPredicted RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 FNDC4Q9H6D8 234 aaPredicted RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 LOC102723971A0A1B0GUV8 181 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 DLEU1O43261 78 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 EIF3GO75821 320 aaKnown RBP eCLIP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 ADCYAP1R1P41586 468 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 SP2Q02086 613 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 OR8G3PP0DMU2 310 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 HLA-DRB4P13762 266 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 FXYD6P3P58550 94 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 AMBRA1Q9C0C7 1298 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM160Q9NX00 188 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 ZNF256Q9Y2P7 627 aaPredicted RBP3.33□□□□□ -1.88
SYNE1-207ENST00000367255 HLA-DRB4X5D2U9 266 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 CEP250Q9BV73 2442 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 TMEM179BQ7Z7N9 219 aa3.33□□□□□ -1.88
SYNE1-207ENST00000367255 NR2C2APQ86WQ0 139 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms