RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 ELOVL5Q9NYP7 299 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 CES1P1Q9UKY3 287 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 CCL27Q9Y4X3 112 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 NDUFA2O43678 99 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 OR2J3O76001 311 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 FAM157BP0CG42 384 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 SLC25A6P12236 298 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 PRSS12P56730 875 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 HERPUD1Q15011 391 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 DGAT2L7PQ6IED9 249 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 ANKRD16Q6P6B7 361 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 OR2Z1Q8NG97 314 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 OR51S1Q8NGJ8 323 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 FAM210BQ96KR6 192 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 HINT3Q9NQE9 182 aaKnown RBP7.7□□□□□ -1.18
SYNE1-206ENST00000367253 G6PC2Q9NQR9 355 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 CISD1Q9NZ45 108 aaKnown RBP7.7□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF107Q9UII5 783 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-206ENST00000367253 TRAPPC1Q9Y5R8 145 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 PSME4Q14997 1843 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 SMCHD1A6NHR9 2005 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 PROB1E7EW31 1015 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 G3V2L1 256 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 TMPRSS11DO60235 418 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 ZFPL1O95159 310 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 IGHV3-9P01782 118 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 OR2T7P0C7T2 308 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 COX5BP10606 129 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 SRD5A1P18405 259 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 GABRB1P18505 474 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 ZXDBP98169 803 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 TCTN1Q2MV58 587 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 Q56UQ5 140 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 C1orf140Q5VVS0 124 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 STUMQ69YW2 141 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 TCTN3Q6NUS6 607 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF343Q6P1L6 599 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 ORAI1Q96D31 301 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 PERPQ96FX8 193 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 PLEKHF2Q9H8W4 249 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 MRPS28Q9Y2Q9 187 aaKnown RBP7.7□□□□□ -1.18
SYNE1-206ENST00000367253 GREB1LQ9C091 1923 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-206ENST00000367253 LOXHD1Q8IVV2 1947 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 PSMB2P49721 201 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 CDKN2DP55273 166 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 INSM1Q01101 510 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-206ENST00000367253 PAX5Q02548 391 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 DGAT2L6Q6ZPD8 337 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 C6orf201Q7Z4U5 140 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 SYT9Q86SS6 491 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 ISCA2Q86U28 154 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 MRGPRX2Q96LB1 330 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 HSPB8Q9UJY1 196 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 DAPP1Q9UN19 280 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 USP3Q9Y6I4 520 aa7.7□□□□□ -1.18
SYNE1-206ENST00000367253 TMEM238LA0A1B0GVL6 79 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 LRRC3CA6NJW4 275 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 HSPB6O14558 160 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 ISG15P05161 165 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 TSPAN31Q12999 210 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 NSUN5P2Q63ZY6 315 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF562Q6V9R5 426 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 SLC26A10Q8NG04 563 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 OR5AN1Q8NGI8 311 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 OR2A1Q8NGT9 310 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 CD200R1Q8TD46 325 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 NEU4Q8WWR8 484 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-206ENST00000367253 RGP1Q92546 391 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-206ENST00000367253 HGDQ93099 445 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 TM4SF19Q96DZ7 209 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 TMEM56Q96MV1 263 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 SFXN3Q9BWM7 321 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 WDR54Q9H977 334 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 HCSTQ9UBK5 93 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 SPAG17Q6Q759 2223 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 KIF13BQ9NQT8 1826 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 MS4A18H0YCH9 400 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 HCRTO43612 131 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 EGR1P18146 543 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 SRMP19623 302 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 COX7A1P24310 79 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 NKG7Q16617 165 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 MS4A18Q3C1V0 323 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 D2HGDHQ8N465 521 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 SLC22A24Q8N4F4 322 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 WDR89Q96FK6 387 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-206ENST00000367253 C5orf49A4QMS7 147 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF716A6NP11 495 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 CLDN34H7C241 214 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 GEMIN2O14893 280 aaKnown RBP7.69□□□□□ -1.18
SYNE1-206ENST00000367253 FRS3O43559 492 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 RPL12P30050 165 aaKnown RBP7.69□□□□□ -1.18
SYNE1-206ENST00000367253 GFERP55789 205 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 PCBP3P57721 371 aaKnown RBP7.69□□□□□ -1.18
SYNE1-206ENST00000367253 C20orf204Q6ZNR8 217 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 SLC16A12Q6ZSM3 486 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 ADGRE4PQ86SQ3 457 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 SP7Q8TDD2 431 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-206ENST00000367253 LRRC29Q8WV35 223 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 NDUFAF3Q9BU61 184 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms