RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 SRSF10O75494 262 aaKnown RBP10.93□□□□□ -0.66
VPS29-201ENST00000360579 CYB5AP00167 134 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 MRPL3P09001 348 aaKnown RBP10.93□□□□□ -0.66
VPS29-201ENST00000360579 ATP6V1B2P21281 511 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 MNAT1P51948 309 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 CDK5Q00535 292 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 KPNB1Q14974 876 aaKnown RBP10.93□□□□□ -0.66
VPS29-201ENST00000360579 ZNF146Q15072 292 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 SPIN3Q5JUX0 258 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 SLC25A26Q70HW3 274 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 FOXRED2Q8IWF2 684 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 OR8U1Q8NH10 309 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 CORO2AQ92828 525 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 BORCS8Q96FH0 119 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 NOL4LQ96MY1 436 aaPredicted RBP10.93□□□□□ -0.66
VPS29-201ENST00000360579 ZNF556Q9HAH1 456 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 ZNF286AQ9HBT8 521 aa10.93□□□□□ -0.66
VPS29-201ENST00000360579 TRBV2A0A0J9YWF9 115 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 TCRBV5S2A0A599 114 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 FAM90A18PA6NE21 464 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 FAM90A16PA6NEW6 464 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 FAM90A20PA6NIJ5 464 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 FAM90A9PA6NNJ1 464 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 FAM90A12PA8MX19 464 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 FAM90A5PA8MXJ8 464 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 PRR32B1ATL7 298 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 LY6LH3BQJ8 138 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 INMTO95050 263 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 SERPINA3P01011 423 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 FAM90A15PP0C7V4 464 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 FAM90A13PP0C7W8 464 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 FAM90A14PP0C7W9 464 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 FAM90A24PP0C7X0 464 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 LYL1P12980 280 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 OSMP13725 252 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 CCL1P22362 96 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 ECI1P42126 302 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 OR3A1P47881 315 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 LUMP51884 338 aaPredicted RBP10.92□□□□□ -0.66
VPS29-201ENST00000360579 TEX38Q6PEX7 206 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 ZNF322Q6U7Q0 402 aaPredicted RBP10.92□□□□□ -0.66
VPS29-201ENST00000360579 BAIAP2L2Q6UXY1 529 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 SLC35E3Q7Z769 313 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 DEFB107AQ8IZN7 70 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 FAM58AQ8N1B3 248 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 C5orf56Q8N8D9 126 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 CCDC54Q8NEL0 328 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 OR4D6Q8NGJ1 314 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 RPEQ96AT9 228 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 RAX2Q96IS3 184 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 CNN2Q99439 309 aaKnown RBP10.92□□□□□ -0.66
VPS29-201ENST00000360579 MNTQ99583 582 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 GON7Q9BXV9 100 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 TTTY10Q9BZA0 68 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 PALMDQ9NP74 551 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 COPS3Q9UNS2 423 aa10.92□□□□□ -0.66
VPS29-201ENST00000360579 AMMECR1Q9Y4X0 333 aaPredicted RBP10.92□□□□□ -0.66
VPS29-201ENST00000360579 SIRT4Q9Y6E7 314 aaPredicted RBP10.92□□□□□ -0.66
VPS29-201ENST00000360579 IGKV1-27A0A075B6S5 117 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 A0A087X0M5 115 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 LCE6AA0A183 80 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 A0A1B0GX30 115 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 FAM172BPA6NC97 362 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 IGHG2P01859 326 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 TMEM11P17152 192 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 PTGFRP43088 359 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 CXCR4P61073 352 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 RBM39Q14498 530 aaKnown RBP10.91□□□□□ -0.66
VPS29-201ENST00000360579 UBE2V2Q15819 145 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 STPG2Q8N412 459 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 TOMM40LQ969M1 308 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 DUX3Q96PT4 197 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 ELAC2Q9BQ52 826 aaKnown RBP10.91□□□□□ -0.66
VPS29-201ENST00000360579 CHST5Q9GZS9 411 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 RBFOX1Q9NWB1 397 aaKnown RBP10.91□□□□□ -0.66
VPS29-201ENST00000360579 IL36RNQ9UBH0 155 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 TAGLN3Q9UI15 199 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 ZNF256Q9Y2P7 627 aaPredicted RBP10.91□□□□□ -0.66
VPS29-201ENST00000360579 SMAD5-AS1Q9Y6J3 95 aa10.91□□□□□ -0.66
VPS29-201ENST00000360579 CCDC182A6NF36 153 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 SEC14L6B5MCN3 397 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 SH2D1BO14796 132 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 SYT7O43581 403 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 ENTPD6O75354 484 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 CST1P01037 141 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 SNRNP70P08621 437 aaKnown RBP10.9□□□□□ -0.66
VPS29-201ENST00000360579 RAP2AP10114 183 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 PRKACAP17612 351 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 DUSP1P28562 367 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 RBP2P50120 134 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 ATP1B3P54709 279 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 HES1Q14469 280 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 KIR2DS1Q14954 304 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 DHFR2Q86XF0 187 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 DNAAF1Q8NEP3 725 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 OR56B4Q8NH76 319 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 OR9G1Q8NH87 305 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 C10orf35Q96D05 121 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 HRASLS5Q96KN8 279 aa10.9□□□□□ -0.66
VPS29-201ENST00000360579 RCHY1Q96PM5 261 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms