RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 CADM3Q8N126 398 aa19.56■□□□□ 0.72
SDF4-202ENST00000360001 PIK3IP1Q96FE7 263 aa19.56■□□□□ 0.72
SDF4-202ENST00000360001 ST6GALNAC5Q9BVH7 336 aa19.56■□□□□ 0.72
SDF4-202ENST00000360001 SPACA1Q9HBV2 294 aa19.56■□□□□ 0.72
SDF4-202ENST00000360001 NUDT15Q9NV35 164 aa19.56■□□□□ 0.72
SDF4-202ENST00000360001 NUBP2Q9Y5Y2 271 aa19.56■□□□□ 0.72
SDF4-202ENST00000360001 TRAV24A0A0B4J272 114 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 A0A0B4J293 547 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 H3BUI4 141 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 ADH4P08319 380 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 ZNF735P0CB33 412 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 APOBEC3AP31941 199 aaPredicted RBP19.55■□□□□ 0.72
SDF4-202ENST00000360001 CFHR2P36980 270 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 ZNF782Q6ZMW2 699 aaPredicted RBP19.55■□□□□ 0.72
SDF4-202ENST00000360001 MOGAT3Q86VF5 341 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 OR51S1Q8NGJ8 323 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 LRRC29Q8WV35 223 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 MAFIPQ8WZ33 124 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 PKDREJQ9NTG1 2253 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 C17orf100A8MU93 164 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 HRH1P35367 487 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 SPIN3Q5JUX0 258 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 ACP7Q6ZNF0 438 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 BTN2A1Q7KYR7 527 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 SUMF2Q8NBJ7 301 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 BEST4Q8NFU0 473 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 OR10Z1Q8NGY1 313 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 OR4K15Q8NH41 348 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 FN3KRPQ9HA64 309 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 ZNF701Q9NV72 531 aaPredicted RBP19.55■□□□□ 0.72
SDF4-202ENST00000360001 CACNA1DQ01668 2161 aa19.55■□□□□ 0.72
SDF4-202ENST00000360001 INMT-MINDY4F8WBC2 141 aa19.54■□□□□ 0.72
SDF4-202ENST00000360001 M0R233 179 aa19.54■□□□□ 0.72
SDF4-202ENST00000360001 FCGR3AP08637 254 aa19.54■□□□□ 0.72
SDF4-202ENST00000360001 TBPP20226 339 aa19.54■□□□□ 0.72
SDF4-202ENST00000360001 GLRA1P23415 457 aa19.54■□□□□ 0.72
SDF4-202ENST00000360001 TNFSF4P23510 183 aa19.54■□□□□ 0.72
SDF4-202ENST00000360001 DTYMKP23919 212 aa19.54■□□□□ 0.72
SDF4-202ENST00000360001 EFNB3Q15768 340 aa19.54■□□□□ 0.72
SDF4-202ENST00000360001 MICBQ29980 383 aa19.54■□□□□ 0.72
SDF4-202ENST00000360001 RNASE10Q5GAN6 216 aaKnown RBP19.54■□□□□ 0.72
SDF4-202ENST00000360001 DIRC2Q96SL1 478 aa19.54■□□□□ 0.72
SDF4-202ENST00000360001 CISD1Q9NZ45 108 aaKnown RBP19.54■□□□□ 0.72
SDF4-202ENST00000360001 PLEKHA6Q9Y2H5 1048 aa19.54■□□□□ 0.72
SDF4-202ENST00000360001 TRAV6A0A075B6T7 132 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 FAM221AA4D161 298 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 DEGS1O15121 323 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 AMY2AP04746 511 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 CD55P08174 381 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 MRPS15P82914 257 aaKnown RBP19.53■□□□□ 0.72
SDF4-202ENST00000360001 MEF2DQ14814 521 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 MST1LQ2TV78 715 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 ZNF672Q499Z4 452 aaPredicted RBP19.53■□□□□ 0.72
SDF4-202ENST00000360001 SLC6A7Q99884 636 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 C12orf4Q9NQ89 552 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 SRRM5B3KS81 715 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 MCRIP1C9JLW8 97 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 HSPB6O14558 160 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 HS3ST1O14792 307 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 OR2H2O95918 312 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 ZNF44P15621 663 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 AMY2BP19961 511 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 BPIFB2Q8N4F0 458 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 RDH5Q92781 318 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 DPCDQ9BVM2 203 aaPredicted RBP19.53■□□□□ 0.72
SDF4-202ENST00000360001 CHST6Q9GZX3 395 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 GCM1Q9NP62 436 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 ZNF462Q96JM2 2506 aa19.53■□□□□ 0.72
SDF4-202ENST00000360001 IGKV1D-8A0A087WSZ0 117 aa19.52■□□□□ 0.72
SDF4-202ENST00000360001 NDUFB6O95139 128 aa19.52■□□□□ 0.72
SDF4-202ENST00000360001 PMP2P02689 132 aa19.52■□□□□ 0.72
SDF4-202ENST00000360001 GLAP06280 429 aa19.52■□□□□ 0.72
SDF4-202ENST00000360001 EGR1P18146 543 aa19.52■□□□□ 0.72
SDF4-202ENST00000360001 RAB25P57735 213 aa19.52■□□□□ 0.72
SDF4-202ENST00000360001 FIP1L1Q6UN15 594 aaKnown RBP19.52■□□□□ 0.72
SDF4-202ENST00000360001 Q6ZPA2 131 aa19.52■□□□□ 0.72
SDF4-202ENST00000360001 ZCCHC24Q8N2G6 241 aaKnown RBP19.52■□□□□ 0.72
SDF4-202ENST00000360001 GCSAMQ8N6F7 178 aa19.52■□□□□ 0.72
SDF4-202ENST00000360001 DHRS9Q9BPW9 319 aa19.52■□□□□ 0.72
SDF4-202ENST00000360001 C20orf85Q9H1P6 137 aa19.52■□□□□ 0.72
SDF4-202ENST00000360001 ABCA4P78363 2273 aa19.52■□□□□ 0.71
SDF4-202ENST00000360001 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.52■□□□□ 0.71
SDF4-202ENST00000360001 C19orf84I3L1E1 186 aa19.52■□□□□ 0.71
SDF4-202ENST00000360001 SH2D1BO14796 132 aa19.52■□□□□ 0.71
SDF4-202ENST00000360001 CSN2P05814 226 aa19.52■□□□□ 0.71
SDF4-202ENST00000360001 BTG1P62324 171 aa19.52■□□□□ 0.71
SDF4-202ENST00000360001 SMIM21Q3B7S5 101 aa19.52■□□□□ 0.71
SDF4-202ENST00000360001 ACTBL2Q562R1 376 aa19.52■□□□□ 0.71
SDF4-202ENST00000360001 RASL12Q9NYN1 266 aa19.52■□□□□ 0.71
SDF4-202ENST00000360001 EDARQ9UNE0 448 aa19.52■□□□□ 0.71
SDF4-202ENST00000360001 FLVCR2Q9UPI3 526 aa19.52■□□□□ 0.71
SDF4-202ENST00000360001 B9A039 149 aa19.51■□□□□ 0.71
SDF4-202ENST00000360001 SIRPB1O00241 398 aa19.51■□□□□ 0.71
SDF4-202ENST00000360001 SLC33A1O00400 549 aaPredicted RBP19.51■□□□□ 0.71
SDF4-202ENST00000360001 HAND1O96004 215 aa19.51■□□□□ 0.71
SDF4-202ENST00000360001 NAPSAO96009 420 aa19.51■□□□□ 0.71
SDF4-202ENST00000360001 KNG1P01042 644 aa19.51■□□□□ 0.71
SDF4-202ENST00000360001 CEBPDP49716 269 aaPredicted RBP19.51■□□□□ 0.71
SDF4-202ENST00000360001 CCL8P80075 99 aa19.51■□□□□ 0.71
SDF4-202ENST00000360001 RBMS2Q15434 407 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms