RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 TMPRSS2O15393 492 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 ZNF737O75373 536 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 WNT2P09544 360 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 PPIAL4FP0DN26 164 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 ARSBP15848 533 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 MGMTP16455 207 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 IKZF1Q13422 519 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 ZNF404Q494X3 552 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 TEX36Q5VZQ5 186 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 STUMQ69YW2 141 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 FAM58AQ8N1B3 248 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 CCDC54Q8NEL0 328 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 PXT1Q8NFP0 134 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 OR4M1Q8NGD0 313 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 CLDND2Q8NHS1 167 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 RAB2BQ8WUD1 216 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 FAM168AQ92567 244 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 RAB1CQ92928 201 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 DGCR14Q96DF8 476 aaKnown RBP3.34□□□□□ -1.87
LIG4-201ENST00000356922 GAFA1Q96PS6 74 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 DIRC2Q96SL1 478 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 HDHD3Q9BSH5 251 aaPredicted RBP3.34□□□□□ -1.87
LIG4-201ENST00000356922 PKIBQ9C010 78 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 SELENOIQ9C0D9 397 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 COMMD3Q9UBI1 195 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 GLS2Q9UI32 602 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 PPIAL4AQ9Y536 164 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 NPTNQ9Y639 398 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 DSCAML1Q8TD84 2053 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 A0A075B6Q4 140 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 OOEPA6NGQ2 149 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 RAB27BO00194 218 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 PDCD5O14737 125 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 HPGDSO60760 199 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 CRTAPO75718 401 aaPredicted RBP3.34□□□□□ -1.87
LIG4-201ENST00000356922 MPIG6BO95866 241 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 OR2H2O95918 312 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 IL1AP01583 271 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 EIF4EP06730 217 aaKnown RBP3.34□□□□□ -1.87
LIG4-201ENST00000356922 FCER2P06734 321 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 FOSL1P15407 271 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 GIFP27352 417 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 PRDX2P32119 198 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 NR4A2P43354 598 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 TMEM33P57088 247 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 ZNF146Q15072 292 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 ZNF181Q2M3W8 571 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 BAIAP2L2Q6UXY1 529 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 ZNF788Q6ZQV5 615 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 C6orf201Q7Z4U5 140 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 TPRA1Q86W33 373 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 LAX1Q8IWV1 398 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 CMTM4Q8IZR5 234 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 ASCC1Q8N9N2 400 aaKnown RBP3.34□□□□□ -1.87
LIG4-201ENST00000356922 OR4S1Q8NGB4 309 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 TBC1D15Q8TC07 691 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 EMG1Q92979 244 aaKnown RBP3.34□□□□□ -1.87
LIG4-201ENST00000356922 UQCC2Q9BRT2 126 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 FAAP24Q9BTP7 215 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 BARX1Q9HBU1 254 aaPredicted RBP3.34□□□□□ -1.87
LIG4-201ENST00000356922 PCDHB16Q9NRJ7 776 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 STEAP1Q9UHE8 339 aa3.34□□□□□ -1.87
LIG4-201ENST00000356922 SIRPB1O00241 398 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 SLC33A1O00400 549 aaPredicted RBP3.34□□□□□ -1.88
LIG4-201ENST00000356922 AVPP01185 164 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 ACAA1P09110 424 aaPredicted RBP3.34□□□□□ -1.88
LIG4-201ENST00000356922 ZNF44P15621 663 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 ELK1P19419 428 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 GABRR1P24046 479 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 CFPP27918 469 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 SOX6P35712 828 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 GPR6P46095 362 aaPredicted RBP3.34□□□□□ -1.88
LIG4-201ENST00000356922 VEGFCP49767 419 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 FGF12P61328 243 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 COL10A1Q03692 680 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 KRTAP1-1Q07627 177 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 CNPY1Q3B7I2 92 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 ATAD3CQ5T2N8 411 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 ELP2Q6IA86 826 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 TCF23Q7RTU1 214 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 CHST4Q8NCG5 386 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 OR51T1Q8NGJ9 327 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 UBALD1Q8TB05 177 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 PLPPR1Q8TBJ4 325 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 Q96M66 194 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 SULT4A1Q9BR01 284 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 ABCB9Q9NP78 766 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 NLKQ9UBE8 527 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 POLDIP2Q9Y2S7 368 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 HIVEP2P31629 2446 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 TRRAPQ9Y4A5 3859 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 MEIOCA2RUB1 952 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 MEGF11A6BM72 1044 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 C22orf46C9J442 243 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 CLDN25C9JDP6 229 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 DVL1O14640 695 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 MMP23AO75900 390 aa3.34□□□□□ -1.88
LIG4-201ENST00000356922 RBM11P57052 281 aaKnown RBP3.34□□□□□ -1.88
LIG4-201ENST00000356922 RPS27AP62979 156 aaKnown RBP3.34□□□□□ -1.88
LIG4-201ENST00000356922 MRPS11P82912 194 aaKnown RBP3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms