RNA–Protein interactions for RNA: ENST00000346855.7

UBE2E1-202, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3 BASIC

Gene UBE2E1, Length 1,398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-202ENST00000346855 NEIL1Q96FI4 390 aaPredicted RBP15.24■□□□□ 0.03
UBE2E1-202ENST00000346855 OR8B2Q96RD0 313 aa15.24■□□□□ 0.03
UBE2E1-202ENST00000346855 LPAR5Q9H1C0 372 aa15.24■□□□□ 0.03
UBE2E1-202ENST00000346855 CCDC59Q9P031 241 aaKnown RBP15.24■□□□□ 0.03
UBE2E1-202ENST00000346855 FAM90A10PA6NDY2 464 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 FAM90A18PA6NE21 464 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 FAM90A16PA6NEW6 464 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 FAM90A20PA6NIJ5 464 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 FAM90A8PA6NJQ4 464 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 FAM90A7PA6NKC0 464 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 FAM90A22PA8MWA6 464 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 FAM90A12PA8MX19 464 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 FAM90A5PA8MXJ8 464 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 FAM90A23PA8MXZ1 464 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 SH2D1BO14796 132 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 FCN3O75636 299 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 CHRM2P08172 466 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 FAM90A15PP0C7V4 464 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 FAM90A13PP0C7W8 464 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 FAM90A14PP0C7W9 464 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 FAM90A24PP0C7X0 464 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 ZNF44P15621 663 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 RAB6AP20340 208 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 COL10A1Q03692 680 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 IKZF1Q13422 519 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 PDCD1Q15116 288 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 TAF9Q16594 264 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 NLRC3Q7RTR2 1065 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 ZNF561Q8N587 486 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 OR5H6Q8NGV6 325 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 PTX4Q96A99 478 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 POM121Q96HA1 1249 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 IFT22Q9H7X7 185 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 ZNF581Q9P0T4 197 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 RAB22AQ9UL26 194 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 SPATA2Q9UM82 520 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 ETV7Q9Y603 341 aa15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 MAP1AP78559 2803 aaPredicted RBP15.23■□□□□ 0.03
UBE2E1-202ENST00000346855 MALRD1Q5VYJ5 2156 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 MED13LQ71F56 2210 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 OTOGQ6ZRI0 2925 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 A0A0A6YYD4 124 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 SIRPB1O00241 398 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 ZNF737O75373 536 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 OR7C1O76099 320 aaPredicted RBP15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 ZNF182P17025 639 aaPredicted RBP15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 GABRR1P24046 479 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 LMO1P25800 156 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 EFNB2P52799 333 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 SEC61A1P61619 476 aaKnown RBP15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 DYNC1I2Q13409 638 aaKnown RBP15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 ZNF841Q6ZN19 808 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 CHST4Q8NCG5 386 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 ZNRF1Q8ND25 227 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 MED30Q96HR3 178 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 NICN1Q9BSH3 213 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 URM1Q9BTM9 101 aaKnown RBP15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 BATF3Q9NR55 127 aa15.22■□□□□ 0.03
UBE2E1-202ENST00000346855 TMEM82A0PJX8 343 aa15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 SLC33A1O00400 549 aaPredicted RBP15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 DEGS1O15121 323 aa15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 PSPNO60542 156 aa15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 HEXAP06865 529 aa15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 SOX6P35712 828 aa15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 PITPNBP48739 271 aa15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 METAP1DQ6UB28 335 aaPredicted RBP15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 C17orf107Q6ZR85 190 aa15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 ASCC1Q8N9N2 400 aaKnown RBP15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 MAPK1IP1LQ8NDC0 245 aa15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 AP3S1Q92572 193 aa15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 SLC25A38Q96DW6 304 aa15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 SNX22Q96L94 193 aa15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 RCC2Q9P258 522 aaKnown RBP15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 ARHGAP32A7KAX9 2087 aa15.21■□□□□ 0.02
UBE2E1-202ENST00000346855 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.2■□□□□ 0.023e-20■■■■■ 39.8
UBE2E1-202ENST00000346855 FLNAP21333 2647 aaKnown RBP15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 TRAV24A0A0B4J272 114 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 A8MXK9 166 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 H7C1Q1 480 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 K7N7A8 449 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 DVL1O14640 695 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 NPY4RP50391 375 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 SCN1BQ07699 218 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 WDR25Q64LD2 544 aaPredicted RBP15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 SIGIRRQ6IA17 410 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 SPNS3Q6ZMD2 512 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 BIVMQ86UB2 503 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 CIARTQ8N365 385 aaPredicted RBP15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 FGFRL1Q8N441 504 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 FAM89BQ8N5H3 189 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 TMEM185AQ8NFB2 350 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 ACOT12Q8WYK0 555 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 SSBP3Q9BWW4 388 aaPredicted RBP15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 FAM234AQ9H0X4 552 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 RHBDL2Q9NX52 303 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 SLC25A10Q9UBX3 287 aaPredicted RBP15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 CLN8Q9UBY8 286 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 TEX15Q9BXT5 2789 aa15.2■□□□□ 0.02
UBE2E1-202ENST00000346855 FOXI3A8MTJ6 420 aaPredicted RBP15.19■□□□□ 0.02
UBE2E1-202ENST00000346855 FAM157AC9JC47 383 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms