RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 UPRTQ96BW1 309 aa9.27□□□□□ -0.93
ECM1-201ENST00000346569 OR2V2Q96R30 315 aa9.27□□□□□ -0.93
ECM1-201ENST00000346569 TINAGL1Q9GZM7 467 aaPredicted RBP9.27□□□□□ -0.93
ECM1-201ENST00000346569 SEBOXQ9HB31 216 aaPredicted RBP9.27□□□□□ -0.93
ECM1-201ENST00000346569 UFSP2Q9NUQ7 469 aa9.27□□□□□ -0.93
ECM1-201ENST00000346569 NUBP2Q9Y5Y2 271 aa9.27□□□□□ -0.93
ECM1-201ENST00000346569 TRAV24A0A0B4J272 114 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 UBE2QL1A1L167 161 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 C17orf100A8MU93 164 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 SRRM5B3KS81 715 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 INMT-MINDY4F8WBC2 141 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 PYCARD-AS1I3L0S3 204 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 WNT9BO14905 357 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 CD55P08174 381 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 TBPP20226 339 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 FAUP35544 74 aaKnown RBP9.26□□□□□ -0.93
ECM1-201ENST00000346569 EFNB3Q15768 340 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 NKPD1Q17RQ9 610 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 ATAD3CQ5T2N8 411 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 OR52W1Q6IF63 320 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 ACP7Q6ZNF0 438 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 CHAC2Q8WUX2 184 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 ITLN1Q8WWA0 313 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 ERGIC1Q969X5 290 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 DIRC2Q96SL1 478 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 SLC6A7Q99884 636 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 CMSS1Q9BQ75 279 aaKnown RBP9.26□□□□□ -0.93
ECM1-201ENST00000346569 HDHD3Q9BSH5 251 aaPredicted RBP9.26□□□□□ -0.93
ECM1-201ENST00000346569 CHST6Q9GZX3 395 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 SPACA1Q9HBV2 294 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 IFT46Q9NQC8 304 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 C1orf123Q9NWV4 160 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 RASL12Q9NYN1 266 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 ZNF230Q9UIE0 474 aaPredicted RBP9.26□□□□□ -0.93
ECM1-201ENST00000346569 EDARQ9UNE0 448 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 RNF115Q9Y4L5 304 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 ROS1P08922 2347 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 HECTD1Q9ULT8 2610 aa9.26□□□□□ -0.93
ECM1-201ENST00000346569 IGKV1D-8A0A087WSZ0 117 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 A0A0B4J293 547 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 M0QYG6 137 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 DEGS1O15121 323 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 NDUFB6O95139 128 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 NXPH2O95156 264 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 NAPSAO96009 420 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 SNU13P55769 128 aaKnown RBP9.25□□□□□ -0.93
ECM1-201ENST00000346569 IKZF1Q13422 519 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 MEF2DQ14814 521 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 SRSF7Q16629 238 aaKnown RBP eCLIP9.25□□□□□ -0.93
ECM1-201ENST00000346569 SWI5Q1ZZU3 235 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 MICBQ29980 383 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 ZNF672Q499Z4 452 aaPredicted RBP9.25□□□□□ -0.93
ECM1-201ENST00000346569 SPIN3Q5JUX0 258 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 VAX1Q5SQQ9 334 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 ZNF782Q6ZMW2 699 aaPredicted RBP9.25□□□□□ -0.93
ECM1-201ENST00000346569 Q6ZPA2 131 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 GCSAMQ8N6F7 178 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 SUMF2Q8NBJ7 301 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 BEST4Q8NFU0 473 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 OR51S1Q8NGJ8 323 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 OR4K15Q8NH41 348 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 Q8TCH9 128 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 ST6GALNAC5Q9BVH7 336 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 WDR13Q9H1Z4 485 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 MCUBQ9NWR8 336 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 SLC2A8Q9NY64 477 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 CISD1Q9NZ45 108 aaKnown RBP9.25□□□□□ -0.93
ECM1-201ENST00000346569 PTPN13Q12923 2485 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 ADGRG4Q8IZF6 3080 aa9.25□□□□□ -0.93
ECM1-201ENST00000346569 TRBV6-6A0A0A6YYG2 114 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 A6NLC8 198 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 B9A039 149 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 MCRIP1C9JLW8 97 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.24□□□□□ -0.93
ECM1-201ENST00000346569 SH2D1BO14796 132 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 OR2H2O95918 312 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 FCGR3AP08637 254 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 H2AFB2P0C5Z0 115 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 IGFBP2P18065 325 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 GLRA1P23415 457 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 HRH1P35367 487 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 RBMXP38159 391 aaKnown RBP9.24□□□□□ -0.93
ECM1-201ENST00000346569 MECP2P51608 486 aaKnown RBP9.24□□□□□ -0.93
ECM1-201ENST00000346569 TNFAIP6P98066 277 aaPredicted RBP9.24□□□□□ -0.93
ECM1-201ENST00000346569 HOXA4Q00056 320 aaPredicted RBP9.24□□□□□ -0.93
ECM1-201ENST00000346569 RNASE10Q5GAN6 216 aaKnown RBP9.24□□□□□ -0.93
ECM1-201ENST00000346569 SHEQ5VZ18 495 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 Q6ZS49 121 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 GAPTQ8N292 157 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 BPIFB2Q8N4F0 458 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 OR5AP2Q8NGF4 316 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 LRRC29Q8WV35 223 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 DYRK2Q92630 601 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 DHRS9Q9BPW9 319 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 FN3KRPQ9HA64 309 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 GCM1Q9NP62 436 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 TREM2Q9NZC2 230 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 FLVCR2Q9UPI3 526 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 LRRK2Q5S007 2527 aa9.24□□□□□ -0.93
ECM1-201ENST00000346569 SPTBN1Q01082 2364 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms