RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 CITED1Q99966 193 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 C8orf4Q9NR00 106 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 GSTK1Q9Y2Q3 226 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 H3BUX3 64 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 SIRPB1O00241 398 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 OR2H2O95918 312 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 HCKP08631 526 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 PROK1P58294 105 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 MEF2CQ06413 473 aaPredicted RBP11.71□□□□□ -0.53
HMGN3-202ENST00000344726 CCDC58Q4VC31 144 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 LDLRAD2Q5SZI1 272 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 RPL22L1Q6P5R6 122 aaKnown RBP11.71□□□□□ -0.53
HMGN3-202ENST00000344726 GDPGP1Q6ZNW5 385 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 LHFPL4Q7Z7J7 247 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 SAXO1Q8IYX7 474 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 DYNAPQ8N1N2 210 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 ZSCAN4Q8NAM6 433 aaPredicted RBP11.71□□□□□ -0.53
HMGN3-202ENST00000344726 ZNF485Q8NCK3 441 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 SETD9Q8NE22 299 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 OR13C5Q8NGS8 318 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 HAVCR2Q8TDQ0 301 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 GGHQ92820 318 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 NKX3-1Q99801 234 aaPredicted RBP11.71□□□□□ -0.53
HMGN3-202ENST00000344726 MEGF9Q9H1U4 602 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 HEXA-AS1Q9H8Q6 139 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 TAS2R4Q9NYW5 299 aa11.71□□□□□ -0.53
HMGN3-202ENST00000344726 A0A1B0GUS0 222 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 hCG_1809904A0A1W2PP81 198 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 A0A1W2PPE2 198 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 A0A1W2PR64 198 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 A0A1W2PRV1 198 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 ODF3BA8MYP8 253 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 OGG1O15527 345 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 KCNAB3O43448 404 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 RPSAP08865 295 aaKnown RBP11.7□□□□□ -0.54
HMGN3-202ENST00000344726 IGHV1-8P0DP01 117 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 CAPGP40121 348 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 DOC2BQ14184 412 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 Q6P435 159 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 TREML4Q6UXN2 200 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 TMPRSS11AQ6ZMR5 421 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 FBLIM1Q8WUP2 373 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 ORAI1Q96D31 301 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 TMEM80Q96HE8 168 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 ZNF714Q96N38 554 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 SSX3Q99909 188 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 NEK6Q9HC98 313 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 EXOSC4Q9NPD3 245 aaKnown RBP11.7□□□□□ -0.54
HMGN3-202ENST00000344726 BABAM2Q9NXR7 383 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 NKX1-2Q9UD57 310 aaPredicted RBP11.7□□□□□ -0.54
HMGN3-202ENST00000344726 EXOSC1Q9Y3B2 195 aaKnown RBP11.7□□□□□ -0.54
HMGN3-202ENST00000344726 RNF114Q9Y508 228 aa11.7□□□□□ -0.54
HMGN3-202ENST00000344726 hADV38S2A0JD32 116 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 IRGMA1A4Y4 181 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 BTBD17A6NE02 478 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 FAM90A8PA6NJQ4 464 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 GABRPO00591 440 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 SH2D1BO14796 132 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 MGST3O14880 152 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 XPNPEP2O43895 674 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 MMP23AO75900 390 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 CLPXO76031 633 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 RBP4P02753 201 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 TMEM225BP0DP42 221 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 MYL12AP19105 171 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 LMO1P25800 156 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 ST3GAL4Q11206 333 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 LY6EQ16553 131 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 ZFP41Q8N8Y5 198 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 OR5R1Q8NH85 324 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 PIFOQ8TCI5 191 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 GPR148Q8TDV2 347 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 TMEM106AQ96A25 262 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 SMIM19Q96E16 107 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 PPA2Q9H2U2 334 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 RHOFQ9HBH0 211 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 LINC00312Q9Y6C7 94 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 HSPE1-MOB4S4R3N1 261 aa11.69□□□□□ -0.54
HMGN3-202ENST00000344726 A0A0G2JK05 382 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 SLC33A1O00400 549 aaPredicted RBP11.68□□□□□ -0.54
HMGN3-202ENST00000344726 ARG1P05089 322 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 RAB3AP20336 220 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 ERP29P30040 261 aaKnown RBP11.68□□□□□ -0.54
HMGN3-202ENST00000344726 P2RX3P56373 397 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 RPS11P62280 158 aaKnown RBP eCLIP11.68□□□□□ -0.54
HMGN3-202ENST00000344726 SCN1BQ07699 218 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 LRRC75BQ2VPJ9 315 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 ZNF626Q68DY1 528 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 DMKNQ6E0U4 476 aaPredicted RBP11.68□□□□□ -0.54
HMGN3-202ENST00000344726 DHRS7BQ6IAN0 325 aaPredicted RBP11.68□□□□□ -0.54
HMGN3-202ENST00000344726 BAIAP2L2Q6UXY1 529 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 LIAT1Q6ZQX7 453 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 C8orf59Q8N0T1 100 aaPredicted RBP11.68□□□□□ -0.54
HMGN3-202ENST00000344726 OR11H6Q8NGC7 330 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 OR52N1Q8NH53 320 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 PPP1R35Q8TAP8 253 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 COQ2Q96H96 371 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 PGLYRP3Q96LB9 341 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 C16orf95Q9H693 158 aa11.68□□□□□ -0.54
HMGN3-202ENST00000344726 GLS2Q9UI32 602 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms