RNA–Protein interactions for RNA: ENST00000341846.9

TRIM29-201, Transcript of tripartite motif containing 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM29, Length 3,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-201ENST00000341846 ZNF529Q6P280 563 aa9.62□□□□□ -0.87
TRIM29-201ENST00000341846 INO80EQ8NBZ0 244 aaPredicted RBP9.62□□□□□ -0.87
TRIM29-201ENST00000341846 CCDC54Q8NEL0 328 aa9.62□□□□□ -0.87
TRIM29-201ENST00000341846 KCNG3Q8TAE7 436 aa9.62□□□□□ -0.87
TRIM29-201ENST00000341846 AQP3Q92482 292 aa9.62□□□□□ -0.87
TRIM29-201ENST00000341846 KLF13Q9Y2Y9 288 aaPredicted RBP9.62□□□□□ -0.87
TRIM29-201ENST00000341846 SHANK1Q9Y566 2161 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 TMEM127O75204 238 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 OR2F2O95006 317 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 IFNA6P05013 189 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 CRYGSP22914 178 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 OR2F1Q13607 317 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 USF2Q15853 346 aaPredicted RBP9.61□□□□□ -0.87
TRIM29-201ENST00000341846 ACOT7LQ6ZUV0 252 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 APH1AQ96BI3 265 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 TMPRSS5Q9H3S3 457 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 MED12LQ86YW9 2145 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 KIAA1549Q9HCM3 1950 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 H7C1Q1 480 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 M0R036 132 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 DNPH1O43598 174 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 NME2P1O60361 137 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 NGFP01138 241 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 CST2P09228 141 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 OTX1P32242 354 aaPredicted RBP9.61□□□□□ -0.87
TRIM29-201ENST00000341846 SPATA46Q5T0L3 261 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 C10orf91Q5T1B1 145 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 CRIP3Q6Q6R5 217 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 DNM1P46Q6ZS02 220 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 PIP4P1Q86T03 277 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 CCDC107Q8WV48 283 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 CHST5Q9GZS9 411 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 PARP12Q9H0J9 701 aaKnown RBP9.61□□□□□ -0.87
TRIM29-201ENST00000341846 UNKLQ9H9P5 680 aaKnown RBP9.61□□□□□ -0.87
TRIM29-201ENST00000341846 SPRR3Q9UBC9 169 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 IGKV1-27A0A075B6S5 117 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 SLC34A2O95436 690 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 AGAP20933 346 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 CFPP27918 469 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 NPY4RP50391 375 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 KCTD9Q7L273 389 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 OR5AP2Q8NGF4 316 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 OR13C8Q8NGS7 320 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 OR4K15Q8NH41 348 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 RNF122Q9H9V4 155 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 CHD8Q9HCK8 2581 aa9.61□□□□□ -0.87
TRIM29-201ENST00000341846 POLEQ07864 2286 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 TRGV5A0A0B4J1U4 118 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 A0A0U1RQV5 110 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 C13orf42A0A1B0GVH6 325 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 AP4M1O00189 453 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 SLC31A2O15432 143 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 CCL1P22362 96 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 CD34P28906 385 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 NOVA1P51513 510 aaKnown RBP9.6□□□□□ -0.87
TRIM29-201ENST00000341846 HIST1H3AP68431 136 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 TCF15Q12870 199 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 FAM76BQ5HYJ3 339 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 ATPAF1Q5TC12 328 aaPredicted RBP9.6□□□□□ -0.87
TRIM29-201ENST00000341846 HIST2H3PS2Q5TEC6 136 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 DRAM2Q6UX65 266 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 FOXL2NBQ6ZUU3 175 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 HIST2H3AQ71DI3 136 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 MDS2Q8NDY4 140 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 CRIM1Q9NZV1 1036 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 CACNA1DQ01668 2161 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 IGHV2-5P01817 119 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 HLA-AP01891 365 aaKnown RBP9.6□□□□□ -0.87
TRIM29-201ENST00000341846 CSTBP04080 98 aaKnown RBP9.6□□□□□ -0.87
TRIM29-201ENST00000341846 EDN3P14138 238 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 RAB6AP20340 208 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 CTSSP25774 331 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 G0S2P27469 103 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 OPRM1P35372 400 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 MECP2P51608 486 aaKnown RBP9.6□□□□□ -0.87
TRIM29-201ENST00000341846 ZNF133P52736 654 aaPredicted RBP9.6□□□□□ -0.87
TRIM29-201ENST00000341846 RRADP55042 308 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 RAB1AP62820 205 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 PJVKQ0ZLH3 352 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 PLCXD3Q63HM9 321 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 CLEC9AQ6UXN8 241 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 TGIF2LXQ8IUE1 241 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 C15orf54Q8N8G6 183 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 TMEM229BQ8NBD8 167 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 MARCH1Q8TCQ1 289 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 MISP3Q96FF7 219 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 BORCS8Q96FH0 119 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 CST11Q9H112 138 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 VSIG4Q9Y279 399 aa9.6□□□□□ -0.87
TRIM29-201ENST00000341846 ATRXP46100 2492 aa9.59□□□□□ -0.87
TRIM29-201ENST00000341846 GTF3C1Q12789 2109 aa9.59□□□□□ -0.87
TRIM29-201ENST00000341846 ZNF850A8MQ14 1090 aa9.59□□□□□ -0.87
TRIM29-201ENST00000341846 RNASEK-C17orf49H0YIS7 233 aa9.59□□□□□ -0.87
TRIM29-201ENST00000341846 PPIHO43447 177 aaKnown RBP9.59□□□□□ -0.87
TRIM29-201ENST00000341846 SERPINA5P05154 406 aa9.59□□□□□ -0.87
TRIM29-201ENST00000341846 ZNF735P0CB33 412 aa9.59□□□□□ -0.87
TRIM29-201ENST00000341846 FOLR2P14207 255 aa9.59□□□□□ -0.87
TRIM29-201ENST00000341846 HIST1H1DP16402 221 aaKnown RBP9.59□□□□□ -0.87
TRIM29-201ENST00000341846 RCC1P18754 421 aaPredicted RBP9.59□□□□□ -0.87
TRIM29-201ENST00000341846 GSK3AP49840 483 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms