RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 CCDC59Q9P031 241 aaKnown RBP14.57□□□□□ -0.08
CHGA-202ENST00000334654 ABRACLQ9P1F3 81 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 RAB22AQ9UL26 194 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 SPATA2Q9UM82 520 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 ZNF469Q96JG9 3925 aaPredicted RBP14.57□□□□□ -0.08
CHGA-202ENST00000334654 FOXI3A8MTJ6 420 aaPredicted RBP14.57□□□□□ -0.08
CHGA-202ENST00000334654 SIGLEC5O15389 551 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 ZNF737O75373 536 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 OR2H2O95918 312 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 IGHV2-5P01817 119 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 IL2RGP31785 369 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 RANBP1P43487 201 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 GABRA2P47869 451 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 KCNJ8Q15842 424 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 SPICQ8N5J4 248 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 FAM216BQ8N7L0 139 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 SLC25A38Q96DW6 304 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 GAL3ST1Q99999 423 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 MRI1Q9BV20 369 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 REG4Q9BYZ8 158 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 IFT22Q9H7X7 185 aa14.57□□□□□ -0.08
CHGA-202ENST00000334654 TMEM82A0PJX8 343 aa14.56□□□□□ -0.08
CHGA-202ENST00000334654 SH2D1BO14796 132 aa14.56□□□□□ -0.08
CHGA-202ENST00000334654 ADAM20O43506 726 aa14.56□□□□□ -0.08
CHGA-202ENST00000334654 PSPNO60542 156 aa14.56□□□□□ -0.08
CHGA-202ENST00000334654 RAB6AP20340 208 aa14.56□□□□□ -0.08
CHGA-202ENST00000334654 SEC61A1P61619 476 aaKnown RBP14.56□□□□□ -0.08
CHGA-202ENST00000334654 COL10A1Q03692 680 aa14.56□□□□□ -0.08
CHGA-202ENST00000334654 DYNC1I2Q13409 638 aaKnown RBP14.56□□□□□ -0.08
CHGA-202ENST00000334654 FIP1L1Q6UN15 594 aaKnown RBP14.56□□□□□ -0.08
CHGA-202ENST00000334654 C17orf107Q6ZR85 190 aa14.56□□□□□ -0.08
CHGA-202ENST00000334654 FGFRL1Q8N441 504 aa14.56□□□□□ -0.08
CHGA-202ENST00000334654 ZNRF1Q8ND25 227 aa14.56□□□□□ -0.08
CHGA-202ENST00000334654 POM121Q96HA1 1249 aa14.56□□□□□ -0.08
CHGA-202ENST00000334654 DCUN1D5Q9BTE7 237 aa14.56□□□□□ -0.08
CHGA-202ENST00000334654 SHARPINQ9H0F6 387 aa14.56□□□□□ -0.08
CHGA-202ENST00000334654 ZNF665Q9H7R5 613 aa14.56□□□□□ -0.08
CHGA-202ENST00000334654 MIOXQ9UGB7 285 aa14.56□□□□□ -0.08
CHGA-202ENST00000334654 TRAV24A0A0B4J272 114 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 FAM90A10PA6NDY2 464 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 FAM90A18PA6NE21 464 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 FAM90A16PA6NEW6 464 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 FAM90A20PA6NIJ5 464 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 FAM90A8PA6NJQ4 464 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 FAM90A7PA6NKC0 464 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 FAM90A22PA8MWA6 464 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 FAM90A12PA8MX19 464 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 FAM90A5PA8MXJ8 464 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 FAM90A23PA8MXZ1 464 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 RNF223E7ERA6 249 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 SLC33A1O00400 549 aaPredicted RBP14.55□□□□□ -0.08
CHGA-202ENST00000334654 TMPRSS2O15393 492 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 CHRM2P08172 466 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 FAM90A15PP0C7V4 464 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 FAM90A13PP0C7W8 464 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 FAM90A14PP0C7W9 464 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 FAM90A24PP0C7X0 464 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 USF1P22415 310 aaPredicted RBP14.55□□□□□ -0.08
CHGA-202ENST00000334654 SOX6P35712 828 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 TMEM50BP56557 158 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 LOXL1Q08397 574 aaPredicted RBP14.55□□□□□ -0.08
CHGA-202ENST00000334654 MPV17LQ2QL34 196 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 LINC00596Q86U02 117 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 RTN4RL2Q86UN3 420 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 DSCAML1Q8TD84 2053 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 NXF2Q9GZY0 626 aaKnown RBP14.55□□□□□ -0.08
CHGA-202ENST00000334654 MMP27Q9H306 513 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 RCC2Q9P258 522 aaKnown RBP14.55□□□□□ -0.08
CHGA-202ENST00000334654 ETV7Q9Y603 341 aa14.55□□□□□ -0.08
CHGA-202ENST00000334654 ACANP16112 2415 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 SIRPB1O00241 398 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 DEGS1O15121 323 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 SOCS1O15524 211 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 GABRR1P24046 479 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 IL13RA1P78552 427 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 SCN1BQ07699 218 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 IKZF1Q13422 519 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 MOGAT2Q3SYC2 334 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 CIARTQ8N365 385 aaPredicted RBP14.54□□□□□ -0.08
CHGA-202ENST00000334654 ZNF561Q8N587 486 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 ACOT12Q8WYK0 555 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 NEIL1Q96FI4 390 aaPredicted RBP14.54□□□□□ -0.08
CHGA-202ENST00000334654 MED30Q96HR3 178 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 RHBDL2Q9NX52 303 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 COMMD3Q9UBI1 195 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 CELSR1Q9NYQ6 3014 aa14.54□□□□□ -0.08
CHGA-202ENST00000334654 A0A075B6Q4 140 aa14.53□□□□□ -0.08
CHGA-202ENST00000334654 K7N7A8 449 aa14.53□□□□□ -0.08
CHGA-202ENST00000334654 RAB27BO00194 218 aa14.53□□□□□ -0.08
CHGA-202ENST00000334654 CLPXO76031 633 aa14.53□□□□□ -0.08
CHGA-202ENST00000334654 OR7C1O76099 320 aaPredicted RBP14.53□□□□□ -0.08
CHGA-202ENST00000334654 ZNF44P15621 663 aa14.53□□□□□ -0.08
CHGA-202ENST00000334654 RPS2P15880 293 aaKnown RBP14.53□□□□□ -0.08
CHGA-202ENST00000334654 CPT2P23786 658 aa14.53□□□□□ -0.08
CHGA-202ENST00000334654 SLC36A1Q7Z2H8 476 aa14.53□□□□□ -0.08
CHGA-202ENST00000334654 CHST4Q8NCG5 386 aa14.53□□□□□ -0.08
CHGA-202ENST00000334654 MAPK1IP1LQ8NDC0 245 aa14.53□□□□□ -0.08
CHGA-202ENST00000334654 OR4S1Q8NGB4 309 aa14.53□□□□□ -0.08
CHGA-202ENST00000334654 SNX22Q96L94 193 aa14.53□□□□□ -0.08
CHGA-202ENST00000334654 URM1Q9BTM9 101 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms