RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 MED22Q15528 200 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 TBCEQ15813 527 aaPredicted RBP12.6□□□□□ -0.39
FOXR1-201ENST00000317011 LDLRAD2Q5SZI1 272 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 RDH10Q8IZV5 341 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 SPARTQ8N0X7 666 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 SVOPQ8N4V2 548 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 OR11H6Q8NGC7 330 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 CFHR4Q92496 578 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 SNX22Q96L94 193 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 CEP19Q96LK0 163 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 OR5M11Q96RB7 305 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 OR14J1Q9UGF5 321 aa12.6□□□□□ -0.39
FOXR1-201ENST00000317011 LSM2Q9Y333 95 aaKnown RBP12.6□□□□□ -0.39
FOXR1-201ENST00000317011 TMEM82A0PJX8 343 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 ODF3BA8MYP8 253 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 E9PI62 339 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 GATBO75879 557 aaKnown RBP12.59□□□□□ -0.39
FOXR1-201ENST00000317011 SERPINA3P01011 423 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 ZNF728P0DKX0 622 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 PAX6P26367 422 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 GABRA5P31644 462 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 BMXP51813 675 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 GTF2A1P52655 376 aaPredicted RBP12.59□□□□□ -0.39
FOXR1-201ENST00000317011 GBX2P52951 348 aaPredicted RBP12.59□□□□□ -0.39
FOXR1-201ENST00000317011 EMX1Q04741 257 aaPredicted RBP12.59□□□□□ -0.39
FOXR1-201ENST00000317011 MEF2CQ06413 473 aaPredicted RBP12.59□□□□□ -0.39
FOXR1-201ENST00000317011 ODF4Q2M2E3 257 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 XAF1Q6GPH4 301 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 C11orf88Q6PI97 169 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 LIAT1Q6ZQX7 453 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 UTS2BQ765I0 119 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 EGFL6Q8IUX8 553 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 BATF2Q8N1L9 274 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 DYNAPQ8N1N2 210 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 ZNF485Q8NCK3 441 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 OR2G2Q8NGZ5 317 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 TRMT10AQ8TBZ6 339 aaKnown RBP12.59□□□□□ -0.39
FOXR1-201ENST00000317011 PP6455Q8WZ26 134 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 MALSU1Q96EH3 234 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 RANBP3Q9H6Z4 567 aaPredicted RBP12.59□□□□□ -0.39
FOXR1-201ENST00000317011 ACOT13Q9NPJ3 140 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 FRRS1LQ9P0K9 344 aa12.59□□□□□ -0.39
FOXR1-201ENST00000317011 A0A087WXM4 84 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 LALBAP00709 142 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 UBCP0CG48 685 aaKnown RBP12.58□□□□□ -0.4
FOXR1-201ENST00000317011 SMIM18P0DKX4 95 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 CCR9P51686 369 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 ZNF146Q15072 292 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 SPHARQ15513 63 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 TMEM244Q5VVB8 128 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 ZNF626Q68DY1 528 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 SLC25A26Q70HW3 274 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 TCF23Q7RTU1 214 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 LHFPL4Q7Z7J7 247 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 OR8H2Q8N162 312 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 Q8N2B8 174 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 ZFP41Q8N8Y5 198 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 OR52N4Q8NGI2 321 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 ADAT3Q96EY9 351 aaPredicted RBP12.58□□□□□ -0.4
FOXR1-201ENST00000317011 RAB18Q9NP72 206 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 BABAM2Q9NXR7 383 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 SIGLEC9Q9Y336 463 aa12.58□□□□□ -0.4
FOXR1-201ENST00000317011 TBL2Q9Y4P3 447 aaKnown RBP12.58□□□□□ -0.4
FOXR1-201ENST00000317011 TGP01266 2768 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 PNMA8CA0A1B0GUJ8 204 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 LOC107986453A0A1B0GWG9 222 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 MAGEA13PA6NCF6 341 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 TSPAN15O95858 294 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 HSMCR30P0CW71 290 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 IGHV1-8P0DP01 117 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 ATF1P18846 271 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 NPBWR2P48146 333 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 RBP2P50120 134 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 DYNLT3P51808 116 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 LGALS4P56470 323 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 NANOS3P60323 173 aaKnown RBP12.57□□□□□ -0.4
FOXR1-201ENST00000317011 MRPL28Q13084 256 aaKnown RBP12.57□□□□□ -0.4
FOXR1-201ENST00000317011 HERPUD1Q15011 391 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 NEDD8Q15843 81 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 LY6EQ16553 131 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 CCBE1Q6UXH8 406 aaPredicted RBP12.57□□□□□ -0.4
FOXR1-201ENST00000317011 ZNF367Q7RTV3 350 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 Q8IYB0 196 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 DTX3Q8N9I9 347 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 OR13D1Q8NGV5 346 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 SLAMF9Q96A28 289 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 BORCS8Q96FH0 119 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 PLEKHA1Q9HB21 404 aa12.57□□□□□ -0.4
FOXR1-201ENST00000317011 TRBV2A0A0J9YWF9 115 aa12.56□□□□□ -0.4
FOXR1-201ENST00000317011 A6NDX4 124 aa12.56□□□□□ -0.4
FOXR1-201ENST00000317011 H3BSH0 61 aa12.56□□□□□ -0.4
FOXR1-201ENST00000317011 CHST1O43916 411 aa12.56□□□□□ -0.4
FOXR1-201ENST00000317011 PSPNO60542 156 aa12.56□□□□□ -0.4
FOXR1-201ENST00000317011 COX7A1P24310 79 aa12.56□□□□□ -0.4
FOXR1-201ENST00000317011 LMO1P25800 156 aa12.56□□□□□ -0.4
FOXR1-201ENST00000317011 ERP29P30040 261 aaKnown RBP12.56□□□□□ -0.4
FOXR1-201ENST00000317011 ATP1B3P54709 279 aa12.56□□□□□ -0.4
FOXR1-201ENST00000317011 PDZK1IP1Q13113 114 aa12.56□□□□□ -0.4
FOXR1-201ENST00000317011 ZNF782Q6ZMW2 699 aaPredicted RBP12.56□□□□□ -0.4
FOXR1-201ENST00000317011 ASCC1Q8N9N2 400 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms