RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 J3QT63 122 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 CYB5BO43169 146 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 PMP22Q01453 160 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 MPV17LQ2QL34 196 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 HOGA1Q86XE5 327 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 OR10V1Q8NGI7 309 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 NANPQ8TBE9 248 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 HPSE2Q8WWQ2 592 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 IMMP1LQ96LU5 166 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 TAAR6Q96RI8 345 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 CXXC4Q9H2H0 198 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 PRR13Q9NZ81 148 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 CRHP06850 196 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 FNDC7Q5VTL7 733 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 INO80CQ6PI98 192 aaPredicted RBP9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 TMEM108Q6UXF1 575 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 ZFP62Q8NB50 900 aaPredicted RBP9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 OR10X1Q8NGY0 326 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 CHAC2Q8WUX2 184 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 ARV1Q9H2C2 271 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 FOXJ2Q9P0K8 574 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 CLEC18AA5D8T8 446 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 RGS13O14921 159 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 ZNF205O95201 554 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 CST4P01036 141 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 ZNF260Q3ZCT1 412 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 TMEM211Q6ICI0 200 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 RPUSD3Q6P087 351 aaKnown RBP9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 BHLHA15Q7RTS1 189 aaPredicted RBP9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 CLEC18CQ8NCF0 446 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 OR10AD1Q8NGE0 317 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 RTN4RQ9BZR6 473 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 RASL12Q9NYN1 266 aa9.97□□□□□ -0.81
PCDHGC3-201ENST00000308177 MDC1Q14676 2089 aaKnown RBP9.96□□□□□ -0.81
PCDHGC3-201ENST00000308177 PRSS44E7EML9 344 aa9.96□□□□□ -0.81
PCDHGC3-201ENST00000308177 ADAM20O43506 726 aa9.96□□□□□ -0.81
PCDHGC3-201ENST00000308177 KCNJ3P48549 501 aa9.96□□□□□ -0.81
PCDHGC3-201ENST00000308177 PSMB3P49720 205 aa9.96□□□□□ -0.81
PCDHGC3-201ENST00000308177 RAB5CP51148 216 aa9.96□□□□□ -0.81
PCDHGC3-201ENST00000308177 LCN15Q6UWW0 184 aa9.96□□□□□ -0.81
PCDHGC3-201ENST00000308177 POC1BQ8TC44 478 aa9.96□□□□□ -0.81
PCDHGC3-201ENST00000308177 MITD1Q8WV92 249 aa9.96□□□□□ -0.81
PCDHGC3-201ENST00000308177 RGP1Q92546 391 aaPredicted RBP9.96□□□□□ -0.81
PCDHGC3-201ENST00000308177 FRZBQ92765 325 aa9.96□□□□□ -0.81
PCDHGC3-201ENST00000308177 ERGIC1Q969X5 290 aa9.96□□□□□ -0.81
PCDHGC3-201ENST00000308177 HEXAP06865 529 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 OR3A1P47881 315 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 LGALS4P56470 323 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 RTL8BQ17RB0 113 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 LGALSLQ3ZCW2 172 aaPredicted RBP9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 SLC25A40Q8TBP6 338 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 SMCO4Q9NRQ5 59 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 AMDHD2Q9Y303 409 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 TRDCB7Z8K6 153 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 AGFG2O95081 481 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 PPYP01298 95 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 NKX6-1P78426 367 aaPredicted RBP9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 EFNB1P98172 346 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 VOPP1Q96AW1 172 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 UHRF2Q96PU4 802 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 HDHD3Q9BSH5 251 aaPredicted RBP9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 NKX6-2Q9C056 277 aaPredicted RBP9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 GPR27Q9NS67 375 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 FRMPD3Q5JV73 1810 aa9.96□□□□□ -0.82
PCDHGC3-201ENST00000308177 BTBD17A6NE02 478 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 ONECUT2O95948 504 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 ADAD2Q8NCV1 583 aaKnown RBP9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 ESRP2Q9H6T0 727 aaKnown RBP9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 CA10Q9NS85 328 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 VSIG4Q9Y279 399 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 TANC1Q9C0D5 1861 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 IGKV1D-43A0A0B4J1Z2 117 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 A0A0G2JK05 382 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 LOC101059948A0A1B0GTJ6 334 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 M0R1X1 148 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 RFPL3SP0C7P2 107 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 VSIG10L2P0DP72 767 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 S100A12P80511 92 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 C10orf128Q5T292 105 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 SERTAD4Q9NUC0 356 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 ABCD4O14678 606 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 HAGHQ16775 308 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 FAM214BQ7L5A3 538 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 DYRK2Q92630 601 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 MESP1Q9BRJ9 268 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 OR2J1Q9GZK6 312 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 SSUH2Q9Y2M2 353 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 UMODP07911 640 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 PRF1P14222 555 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 ATP1A1-AS1Q5TC04 95 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 RBMXL3Q8N7X1 1067 aaKnown RBP9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 ZNF441Q8N8Z8 693 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 MRGPRDQ8TDS7 321 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 ADGRG7Q96K78 797 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 NMES1Q9C002 83 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 SHARPINQ9H0F6 387 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 SLC2A9Q9NRM0 540 aa9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 GOLGB1Q14789 3259 aaKnown RBP9.95□□□□□ -0.82
PCDHGC3-201ENST00000308177 DEFB108AA8MXU0 73 aa9.94□□□□□ -0.82
PCDHGC3-201ENST00000308177 C3orf80F5H4A9 247 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms