RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 METTL15P1P0C7V9 234 aa11.66□□□□□ -0.54
DDX54-201ENST00000306014 P2RY1P47900 373 aa11.66□□□□□ -0.54
DDX54-201ENST00000306014 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.66□□□□□ -0.54
DDX54-201ENST00000306014 OR10P1Q8NGE3 313 aa11.66□□□□□ -0.54
DDX54-201ENST00000306014 OR13D1Q8NGV5 346 aa11.66□□□□□ -0.54
DDX54-201ENST00000306014 EDEM2Q9BV94 578 aa11.66□□□□□ -0.54
DDX54-201ENST00000306014 MASP2O00187 686 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 PCED1AQ9H1Q7 454 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 RIMS4Q9H426 269 aaPredicted RBP11.65□□□□□ -0.54
DDX54-201ENST00000306014 LIN7CQ9NUP9 197 aaKnown RBP11.65□□□□□ -0.54
DDX54-201ENST00000306014 PPYP01298 95 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 SMIM6P0DI80 62 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 MLF1P58340 268 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 RAC1P63000 192 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 TBC1D28Q2M2D7 210 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 TBC1D26Q86UD7 250 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 CARFQ8N187 725 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 LRRC75AQ8NAA5 344 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 UBAC2Q8NBM4 344 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 ADGRG7Q96K78 797 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 DUSP13Q9UII6 198 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 LHFPL6Q9Y693 200 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 NKX2-6A6NCS4 301 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 MSGN1A6NI15 193 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 MPPED1O15442 326 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 KRASP01116 189 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 NOVA1P51513 510 aaKnown RBP11.65□□□□□ -0.54
DDX54-201ENST00000306014 DYNLT3P51808 116 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 FGF8P55075 233 aaPredicted RBP11.65□□□□□ -0.54
DDX54-201ENST00000306014 UNC119Q13432 240 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 ZNF705AQ6ZN79 300 aaPredicted RBP11.65□□□□□ -0.54
DDX54-201ENST00000306014 FGF11Q92914 225 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 OSGIN2Q9Y236 505 aa11.65□□□□□ -0.54
DDX54-201ENST00000306014 RNF222A6NCQ9 220 aa11.65□□□□□ -0.55
DDX54-201ENST00000306014 MPTX1A8MV57 137 aa11.65□□□□□ -0.55
DDX54-201ENST00000306014 SEC11BP0C7V7 166 aa11.65□□□□□ -0.55
DDX54-201ENST00000306014 EDDM3BP56851 147 aa11.65□□□□□ -0.55
DDX54-201ENST00000306014 EWSR1Q01844 656 aaKnown RBP eCLIP11.65□□□□□ -0.55
DDX54-201ENST00000306014 PLPPR5Q32ZL2 321 aa11.65□□□□□ -0.55
DDX54-201ENST00000306014 VHLLQ6RSH7 139 aa11.65□□□□□ -0.55
DDX54-201ENST00000306014 BAGE3Q86Y29 109 aa11.65□□□□□ -0.55
DDX54-201ENST00000306014 BAGE2Q86Y30 109 aa11.65□□□□□ -0.55
DDX54-201ENST00000306014 ERGIC1Q969X5 290 aa11.65□□□□□ -0.55
DDX54-201ENST00000306014 CLDN23Q96B33 292 aa11.65□□□□□ -0.55
DDX54-201ENST00000306014 MDC1Q14676 2089 aaKnown RBP11.65□□□□□ -0.55
DDX54-201ENST00000306014 CLDN34H7C241 214 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 CD200P41217 278 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 PRDX4Q13162 271 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 C9orf152Q5JTZ5 239 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 OR2M3Q8NG83 312 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 OR11L1Q8NGX0 322 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 FAM210BQ96KR6 192 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 HIPK2Q9H2X6 1198 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 SLC2A8Q9NY64 477 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 CACNG5Q9UF02 275 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 POLDIP2Q9Y2S7 368 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 ABCA7Q8IZY2 2146 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 CHST1O43916 411 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 IRF2P14316 349 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 SLC35G3Q8N808 338 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 OR10D3Q8NH80 312 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 APOBEC3DQ96AK3 386 aaPredicted RBP11.64□□□□□ -0.55
DDX54-201ENST00000306014 OR51I2Q9H344 312 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 STARD10Q9Y365 291 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 MEX3AA1L020 520 aaKnown RBP11.64□□□□□ -0.55
DDX54-201ENST00000306014 ACTL6BO94805 426 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 HNF1AP20823 631 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 ZNF816Q0VGE8 651 aaPredicted RBP11.64□□□□□ -0.55
DDX54-201ENST00000306014 HLA-BQ31612 363 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 AQP10Q96PS8 301 aa11.64□□□□□ -0.55
DDX54-201ENST00000306014 EP300Q09472 2414 aaPredicted RBP11.64□□□□□ -0.55
DDX54-201ENST00000306014 THSD7BQ9C0I4 1608 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 SH2D1BO14796 132 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 ACTL6AO96019 429 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 ZNF154Q13106 437 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 LY6G6FQ5SQ64 297 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 VWCEQ96DN2 955 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 TECTBQ96PL2 329 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 UHRF2Q96PU4 802 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 ACTR3CQ9C0K3 210 aaPredicted RBP11.63□□□□□ -0.55
DDX54-201ENST00000306014 PRO1933Q9H354 126 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 UCK1Q9HA47 277 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 RCC2Q9P258 522 aaKnown RBP11.63□□□□□ -0.55
DDX54-201ENST00000306014 IGKV1D-43A0A0B4J1Z2 117 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 ARGFXA6NJG6 315 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 IGKV3-11P04433 115 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 HKR1P10072 659 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 CALCRP30988 508 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 ARR3P36575 388 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 PRAMEF5Q5TYX0 476 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 PRAMEF6Q5VXH4 476 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 GAPTQ8N292 157 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 FLVCR1-AS1Q8TAF5 88 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 TMEM37Q8WXS4 190 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 SLC25A28Q96A46 364 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 DEFB127Q9H1M4 99 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 OPA3Q9H6K4 179 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 P4HTMQ9NXG6 502 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 B3GAT1Q9P2W7 334 aa11.63□□□□□ -0.55
DDX54-201ENST00000306014 ZNF391Q9UJN7 358 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms