RNA–Protein interactions for RNA: ENST00000264001.8

CKLF-201, Transcript of chemokine like factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CKLF, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-201ENST00000264001 LDLRAD2Q5SZI1 272 aa16.34■□□□□ 0.21
CKLF-201ENST00000264001 SERPINA12Q8IW75 414 aa16.34■□□□□ 0.21
CKLF-201ENST00000264001 ZNF555Q8NEP9 628 aa16.34■□□□□ 0.21
CKLF-201ENST00000264001 SMPD3Q9NY59 655 aaPredicted RBP16.34■□□□□ 0.21
CKLF-201ENST00000264001 SIGLEC9Q9Y336 463 aa16.34■□□□□ 0.21
CKLF-201ENST00000264001 TET2Q6N021 2002 aaPredicted RBP16.33■□□□□ 0.21
CKLF-201ENST00000264001 VGLL3A8MV65 326 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 CHST1O43916 411 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 ALX3O95076 343 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 OR2H2O95918 312 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 HCKP08631 526 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 ERP29P30040 261 aaKnown RBP16.33■□□□□ 0.2
CKLF-201ENST00000264001 KIR2DS4P43632 304 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 DYNC1I2Q13409 638 aaKnown RBP16.33■□□□□ 0.2
CKLF-201ENST00000264001 FAM189A2Q15884 450 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 SMN1Q16637 294 aaKnown RBP16.33■□□□□ 0.2
CKLF-201ENST00000264001 ZSCAN26Q16670 478 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 LIAT1Q6ZQX7 453 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 SAXO1Q8IYX7 474 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 PARP16Q8N5Y8 322 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 OR5D14Q8NGL3 314 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 OR4C13Q8NGP0 309 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 TSEN15Q8WW01 171 aaKnown RBP16.33■□□□□ 0.2
CKLF-201ENST00000264001 FOXRED1Q96CU9 486 aaPredicted RBP16.33■□□□□ 0.2
CKLF-201ENST00000264001 MALSU1Q96EH3 234 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 RDH12Q96NR8 316 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 DHDHQ9UQ10 334 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 SESN1Q9Y6P5 492 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 CMYA5Q8N3K9 4069 aa16.33■□□□□ 0.2
CKLF-201ENST00000264001 MEGF11A6BM72 1044 aa16.32■□□□□ 0.2
CKLF-201ENST00000264001 SULT1B1O43704 296 aa16.32■□□□□ 0.2
CKLF-201ENST00000264001 WBP4O75554 376 aaKnown RBP16.32■□□□□ 0.2
CKLF-201ENST00000264001 LIMS3P0CW19 117 aa16.32■□□□□ 0.2
CKLF-201ENST00000264001 LIMS4P0CW20 117 aa16.32■□□□□ 0.2
CKLF-201ENST00000264001 GTF2A1P52655 376 aaPredicted RBP16.32■□□□□ 0.2
CKLF-201ENST00000264001 P2RX3P56373 397 aa16.32■□□□□ 0.2
CKLF-201ENST00000264001 ZP1P60852 638 aa16.32■□□□□ 0.2
CKLF-201ENST00000264001 KISS1Q15726 138 aa16.32■□□□□ 0.2
CKLF-201ENST00000264001 SSX2Q16385 188 aa16.32■□□□□ 0.2
CKLF-201ENST00000264001 LPCAT4Q643R3 524 aa16.32■□□□□ 0.2
CKLF-201ENST00000264001 TRAPPC6BQ86SZ2 158 aa16.32■□□□□ 0.2
CKLF-201ENST00000264001 MMP27Q9H306 513 aa16.32■□□□□ 0.2
CKLF-201ENST00000264001 RANBP3Q9H6Z4 567 aaPredicted RBP16.32■□□□□ 0.2
CKLF-201ENST00000264001 RHOFQ9HBH0 211 aa16.32■□□□□ 0.2
CKLF-201ENST00000264001 FGF20Q9NP95 211 aaPredicted RBP16.32■□□□□ 0.2
CKLF-201ENST00000264001 UBE2J1Q9Y385 318 aaPredicted RBP16.32■□□□□ 0.2
CKLF-201ENST00000264001 PCDHGB5Q9Y5G0 923 aa16.32■□□□□ 0.2
CKLF-201ENST00000264001 TMEM225BP0DP42 221 aa16.31■□□□□ 0.2
CKLF-201ENST00000264001 LMO1P25800 156 aa16.31■□□□□ 0.2
CKLF-201ENST00000264001 RAB13P51153 203 aa16.31■□□□□ 0.2
CKLF-201ENST00000264001 IL18R1Q13478 541 aa16.31■□□□□ 0.2
CKLF-201ENST00000264001 HAVCR2Q8TDQ0 301 aa16.31■□□□□ 0.2
CKLF-201ENST00000264001 STMN2Q93045 179 aa16.31■□□□□ 0.2
CKLF-201ENST00000264001 JAM3Q9BX67 310 aa16.31■□□□□ 0.2
CKLF-201ENST00000264001 NPFFR1Q9GZQ6 430 aa16.31■□□□□ 0.2
CKLF-201ENST00000264001 TMEM133Q9H2Q1 129 aa16.31■□□□□ 0.2
CKLF-201ENST00000264001 ABCB10Q9NRK6 738 aa16.31■□□□□ 0.2
CKLF-201ENST00000264001 TCF19Q9Y242 345 aa16.31■□□□□ 0.2
CKLF-201ENST00000264001 IGHV2-26A0A0B4J1V2 119 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 MMP23AO75900 390 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 CLIC3O95833 236 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 ZNF44P15621 663 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 EFNB2P52799 333 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 SCN1BQ07699 218 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 AESQ08117 197 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 MINOS1Q5TGZ0 78 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 ZNF691Q5VV52 312 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 Q6P435 159 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 OR2T6Q8NHC8 308 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 CNIH3Q8TBE1 160 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 RPS4Y2Q8TD47 263 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 RGP1Q92546 391 aaPredicted RBP16.3■□□□□ 0.2
CKLF-201ENST00000264001 CLEC7AQ9BXN2 247 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 MINOS1-NBL1R4GNA1 71 aa16.3■□□□□ 0.2
CKLF-201ENST00000264001 A0A0G2JK05 382 aa16.29■□□□□ 0.2
CKLF-201ENST00000264001 FUOMA2VDF0 154 aa16.29■□□□□ 0.2
CKLF-201ENST00000264001 DCKP27707 260 aa16.29■□□□□ 0.2
CKLF-201ENST00000264001 GLIPR1P48060 266 aa16.29■□□□□ 0.2
CKLF-201ENST00000264001 SOX2P48431 317 aa16.29■□□□□ 0.2
CKLF-201ENST00000264001 ETV1P50549 477 aa16.29■□□□□ 0.2
CKLF-201ENST00000264001 LRRC36Q1X8D7 754 aa16.29■□□□□ 0.2
CKLF-201ENST00000264001 XAF1Q6GPH4 301 aa16.29■□□□□ 0.2
CKLF-201ENST00000264001 CCBE1Q6UXH8 406 aaPredicted RBP16.29■□□□□ 0.2
CKLF-201ENST00000264001 OR51A2Q8NGJ7 313 aa16.29■□□□□ 0.2
CKLF-201ENST00000264001 NDNFQ8TB73 568 aa16.29■□□□□ 0.2
CKLF-201ENST00000264001 NKX3-1Q99801 234 aaPredicted RBP16.29■□□□□ 0.2
CKLF-201ENST00000264001 CDCA4Q9BXL8 241 aa16.29■□□□□ 0.2
CKLF-201ENST00000264001 FOXJ3Q9UPW0 622 aa16.29■□□□□ 0.2
CKLF-201ENST00000264001 TRGV10A0A0A0MS01 117 aa16.28■□□□□ 0.2
CKLF-201ENST00000264001 A6NDX4 124 aa16.28■□□□□ 0.2
CKLF-201ENST00000264001 SLC33A1O00400 549 aaPredicted RBP16.28■□□□□ 0.2
CKLF-201ENST00000264001 DEGS1O15121 323 aa16.28■□□□□ 0.2
CKLF-201ENST00000264001 TSPAN15O95858 294 aa16.28■□□□□ 0.2
CKLF-201ENST00000264001 JUNBP17275 347 aaPredicted RBP16.28■□□□□ 0.2
CKLF-201ENST00000264001 RAB3AP20336 220 aa16.28■□□□□ 0.2
CKLF-201ENST00000264001 MTNR1BP49286 362 aa16.28■□□□□ 0.2
CKLF-201ENST00000264001 HERPUD1Q15011 391 aa16.28■□□□□ 0.2
CKLF-201ENST00000264001 CDK5R1Q15078 307 aa16.28■□□□□ 0.2
CKLF-201ENST00000264001 PRAMEF5Q5TYX0 476 aa16.28■□□□□ 0.2
CKLF-201ENST00000264001 OR2G6Q5TZ20 316 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms